Paweł Nałęcz-Jawecki: Difference between revisions

Latest revision as of 17:06, 14 September 2024

M.Sc., Ph.D. student

Contact

e-mail at ippt.pan.pl: panaj
tel.: +48 22 8261280 ext. 450
room: 310

Institute of Fundamental Technological Research
Polish Academy of Sciences
Pawińskiego 5B, 02-106 Warsaw, Poland

Publications

Information transmission in a cell monolayer: A numerical study
Nałęcz-Jawecki P, Szyc P, Grabowski F, Kochańczyk M, Lipniacki T.
(submitted)
bioRxiv

Predictive power of non-identifiable models
Grabowski F, Nałęcz-Jawecki P, Lipniacki T
Scientific Reports 13:11143 (2023)
PubMed CrossRef | bioRxiv Code

The MAPK/ERK channel capacity exceeds 6 bit/hour
Nałęcz-Jawecki P, Gagliardi PA, Kochańczyk M, Dessauges C, Pertz O, Lipniacki T
PLOS Computational Biology 19(5):e1011155 (2023)
PubMed CrossRef | bioRxiv Code Data

From light-powered motors, to micro-grippers, to crawling caterpillars, snails and beyond—light-responsive oriented polymers in action
Rogóż M, Dziekan Z, Dradrach K, Zmyślony M, Nałęcz-Jawecki P, Grabowski P, Fabjanowicz B, Podgórska M, Kudzia A, Wasylczyk P.
Materials 15(22):8214 (2022)
PubMed CrossRef

Optical pliers: Micrometer-scale, light-driven tools grown on optical fibers
Zmyślony M, Dradrach K, Haberko J, Dradrach K, Haberko J, Nałęcz-Jawecki P, Rogóż M, Wasylczyk P
Advanced Materials 32(33):2002779 (2020)
PubMed CrossRef

Traveling and standing fronts on curved surfaces
Białecki S, Nałęcz-Jawecki P, Kaźmierczak B, Lipniacki T
Physica D: Nonlinear Phenomena 401:132215 (2020)
CrossRef

Mean-potential law in evolutionary games
Nałęcz-Jawecki P, Miękisz J
Physical Review Letters 120(2):028101 (2018)
PubMed CrossRef

Importins promote high-frequency NF-κB oscillations increasing information channel capacity
Korwek Z, Tudelska K, Nałęcz-Jawecki P, Czerkies M, Prus W, Markiewicz J, Kochańczyk M, Lipniacki T
Biology Direct 11:61 (2016)
PubMed CrossRef | PDF Scheme-PDF SuppModelInfo-PDF SuppModelCode-BNGL SuppFigs-PDF SuppImages-ZIP

Effective reaction rates for diffusion-limited reaction cycles
Nałęcz-Jawecki P, Szymańska P, Kochańczyk M, Miękisz J, Lipniacki T
Journal of Chemical Physics 143(21):215102 (2015)
PubMed CrossRef | PDF-ms

@@ Line 12: / Line 12: @@
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 ===Publications===
-* '''The rate of information transmission through the MAPK/ERK signaling pathway stimulated&nbsp;in a&nbsp;pulsatile manner'''<br/><span class="pmbm">Nałęcz-Jawecki&nbsp;P</span>, <span class="author">Gagliardi&nbsp;PA</span>, <span class="pmbm">Kochańczyk&nbsp;M</span>, <span class="author">Dessauges&nbsp;C</span>, <span class="author">Pertz&nbsp;O</span>, <span class="pmbm">Lipniacki&nbsp;T</span><br/>  (submitted) [https://doi.org/10.1101/2022.03.17.484713 bioRxiv]
+* '''Information transmission in a cell monolayer: A numerical study'''<br/><span class="author">Nałęcz-Jawecki&nbsp;P</span>, <span class="author">Szyc&nbsp;P</span>, <span class="author">Grabowski&nbsp;F</span>, <span class="author">Kochańczyk&nbsp;M</span>, <span class="author">Lipniacki&nbsp;T</span>.<br/>(submitted)<br/>[https://www.biorxiv.org/content/10.1101/2024.06.21.600012v1 bioRxiv]
+* '''Predictive power of non-identifiable models'''<br/><span class="pmbm">Grabowski&nbsp;F</span>, <span class="pmbm">Nałęcz-Jawecki&nbsp;P</span>, <span class="pmbm">Lipniacki&nbsp;T</span><br/>''Scientific&nbsp;Reports'' <u>13</u>:11143 (2023)<br/>[https://pubmed.ncbi.nlm.nih.gov/37429934 PubMed] [https://doi.org/10.1038/s41598-023-37939-8 CrossRef] | [https://doi.org/10.1101/2023.04.07.536025 bioRxiv] [https://github.com/grfrederic/identifiability Code]
+* '''The MAPK/ERK channel capacity exceeds 6 bit/hour'''<br/><span class="pmbm">Nałęcz-Jawecki&nbsp;P</span>, <span class="author">Gagliardi&nbsp;PA</span>, <span class="pmbm">Kochańczyk&nbsp;M</span>, <span class="author">Dessauges&nbsp;C</span>, <span class="author">Pertz&nbsp;O</span>, <span class="pmbm">Lipniacki&nbsp;T</span><br/>''PLOS&nbsp;Computational&nbsp;Biology'' <u>19</u>(5):e1011155 (2023)<br/>[https://pubmed.ncbi.nlm.nih.gov/37216347 PubMed] [https://doi.org/10.1371/journal.pcbi.1011155 CrossRef] | [https://doi.org/10.1101/2022.03.17.484713 bioRxiv] [https://github.com/pawelnalecz/pulsatile-information Code] [https://doi.org/10.5281/zenodo.7472959 Data]
 * '''From light-powered motors, to micro-grippers, to crawling caterpillars, snails and beyond—light-responsive oriented polymers in action'''<br/><span class="author">Rogóż&nbsp;M</span>, <span class="author">Dziekan&nbsp;Z</span>, <span class="author">Dradrach&nbsp;K</span>, <span class="author">Zmyślony&nbsp;M</span>, <span class="author">Nałęcz-Jawecki&nbsp;P</span>, <span class="author">Grabowski&nbsp;P</span>, <span class="author">Fabjanowicz&nbsp;B</span>, <span class="author">Podgórska&nbsp;M</span>, <span class="author">Kudzia&nbsp;A</span>, <span class="author">Wasylczyk&nbsp;P</span>.<br/>''Materials'' <u>15</u>(22):8214 (2022)<br/>[https://pubmed.ncbi.nlm.nih.gov/36431699 PubMed] [https://doi.org/10.3390/ma15228214 CrossRef]
@@ Line 20: / Line 24: @@
 * '''Traveling and standing fronts on curved surfaces'''<br/><span class="author">Białecki S</span>, <span class="author">Nałęcz-Jawecki P</span>, <span class="author">Kaźmierczak B</span>,  <span class="author">Lipniacki T</span><br/>''Physica D: Nonlinear Phenomena'' <u>401</u>:132215 (2020)<br/>[http://dx.doi.org/10.1016/j.physd.2019.132215 CrossRef]
-* '''Mean-potential law in evolutionary games'''<br/><span class="author">Nałęcz-Jawecki P</span>, <span class="author">Miękisz&nbsp;J</span><br/>''Physical Review Letters'' <u>120</u>(2):028101 (2018)<br/>[https://doi.org/10.1103/PhysRevLett.120.028101 CrossRef]
+* '''Mean-potential law in evolutionary games'''<br/><span class="author">Nałęcz-Jawecki P</span>, <span class="author">Miękisz&nbsp;J</span><br/>''Physical Review Letters'' <u>120</u>(2):028101 (2018)<br/>[https://pubmed.ncbi.nlm.nih.gov/29376694 PubMed] [https://doi.org/10.1103/PhysRevLett.120.028101 CrossRef]
 * '''Importins promote high-frequency NF-&kappa;B oscillations increasing information channel&nbsp;capacity'''<br/><span class="author">Korwek Z</span>, <span class="author">Tudelska K</span>, <span class="author">Nałęcz-Jawecki P</span>, <span class="author">Czerkies M</span>, <span class="author">Prus W</span>, <span class="author">Markiewicz J</span>, <span class="author">Kochańczyk&nbsp;M</span>, <span class="author">Lipniacki T</span><br/>''Biology Direct'' <u>11</u>:61 (2016)<br/>[http://www.ncbi.nlm.nih.gov/pubmed/27835978 PubMed] [http://dx.doi.org/10.1186/s13062-016-0164-z CrossRef] | [http://pmbm.ippt.pan.pl/publications/Korwek-2016-BiolDirect.pdf PDF] [http://pmbm.ippt.pan.pl/publications/supplementary/Korwek-2016-BiolDirect-Fig1d-HiRes.pdf Scheme-PDF] [http://pmbm.ippt.pan.pl/publications/supplementary/Korwek-2016-BiolDirect-AddFile1-ModelDescription.pdf SuppModelInfo-PDF] [http://pmbm.ippt.pan.pl/publications/supplementary/Korwek-2016-BiolDirect-AddFile2-NFkBImportinsModel.bngl SuppModelCode-BNGL] [http://pmbm.ippt.pan.pl/publications/supplementary/Korwek-2016-BiolDirect-AddFile3-SuppFigs-S1-to-S7.pdf SuppFigs-PDF] [http://pmbm.ippt.pan.pl/publications/supplementary/Korwek-2016-BiolDirect-AddFiles4567-SuppImages.zip SuppImages-ZIP]
 * '''Effective reaction rates for diffusion-limited reaction cycles'''<br/><span class="author">Nałęcz-Jawecki P</span>, <span class="author">Szymańska P</span>, <span class="author">Kochańczyk&nbsp;M</span>, <span class="author">Miękisz J</span>, <span class="author">Lipniacki T</span><br/>''Journal of Chemical Physics'' <u>143</u>(21):215102 (2015)<br/>[http://www.ncbi.nlm.nih.gov/pubmed/26646890 PubMed] [http://dx.doi.org/10.1063/1.4936131 CrossRef] | [http://pmbm.ippt.pan.pl/publications/Nalecz-Jawecki-2015-JChemPhys-MS.pdf PDF-ms]