Joanna Jaruszewicz-Błońska: Difference between revisions

Revision as of 11:16, 4 December 2017

Ph.D., Assistant Professor

Contact

e-mail at ippt.pan.pl: jjarusz
tel.: +48 22 8261280 ext. 411
room: 326

Institute of Fundamental Technological Research
Polish Academy of Sciences
Pawińskiego 5B, 02-106 Warsaw, Poland

Publications

Czerkies M, Korwek Z, Prus W, Kochańczyk M, Jaruszewicz-Błońska J, Tudelska K, Błoński S, Kimmel M, Brasier AR, Lipniacki T. Cell fate in antiviral response is decided in the crosstalk of the IRF, NF-κB and JAK/STAT pathways, Nat Commun (provisionally accepted)

Jaruszewicz-Błońska J, Lipniacki T. Genetic toggle switch controlled by bacterial growth rate, BMC Systems Biology 11:117 (2017) CrossRef

Kochańczyk M, Kocieniewski P, Kozłowska E, Jaruszewicz-Błońska J, Sparta B, Pargett M, Albeck JG, Hlavacek WS, Lipniacki T. Relaxation oscillations and hierarchy of feedbacks in MAPK signaling, Sci Rep 6:38244 (2017) PubMed CrossRef | PDF SuppInfo-PDF SuppCode-BNG SuppCode-MatCont SuppCode-BNG-noisy SuppCode-Comsol SuppMovie

Jaruszewicz J, Kimmel M, Lipniacki T. Stability of bacterial toggle switches is enhanced by cell-cycle lengthening by several orders of magnitude, Phys Rev E 89(2):022710 (2014) PubMed CrossRef | PDF-ms

Kochańczyk M, Jaruszewicz J, Lipniacki T. Stochastic transitions in a bistable reaction system on the membrane, J R Soc Interface 10(84):20130151 (2013) PubMed CrossRef | PDF Supp-PDF Supp-movies

Jaruszewicz J, Lipniacki T. Toggle switch: Noise determines the winning gene, Phys Biol 10(3):035007 (2013) PubMed CrossRef | PDF-ms

Jaruszewicz J, Zuk PJ, Lipniacki T. Type of noise defines global attractors in bistable molecular regulatory systems, J Theor Biol 317:140-151 (2013; online 2012) PubMed CrossRef | PDF-ms

Zuk PJ, Kochańczyk M, Jaruszewicz J, Bednorz W, Lipniacki T. Dynamics of a stochastic spatially extended system predicted by comparing deterministic and stochastic attractors of the corresponding birth-death process, Phys Biol 5(9):055002 (2012) PubMed CrossRef | PDF-ms

Theses

Ph.D. Thesis: PDF (defended with distinction)

@@ Line 17: / Line 17: @@
 * <span class="pmbm">Czerkies M</span>, <span class="pmbm">Korwek Z</span>, <span class="pmbm">Prus W</span>, <span class="pmbm">Kochańczyk M</span>, <span class="pmbm">Jaruszewicz-Błońska J</span>, <span class="pmbm">Tudelska K</span>, <span class="pmbm">Błoński S</span>, <span class="nopmbm">Kimmel M</span>, <span class="nopmbm">Brasier AR</span>, <span class="pmbm">Lipniacki T</span>. '''Cell fate in antiviral response is decided in the crosstalk of the IRF, NF-κB and JAK/STAT pathways''', ''Nat&nbsp;Commun'' (provisionally accepted)
-* <span class="pmbm">Jaruszewicz-Błońska J</span>, <span class="pmbm">Lipniacki T</span>. '''Genetic toggle switch controlled by bacterial growth rate''', ''BMC Syst&nbsp;Biol'' (accepted)
+* <span class="pmbm">Jaruszewicz-Błońska J</span>, <span class="pmbm">Lipniacki T</span>. '''Genetic toggle switch controlled by bacterial growth rate''', ''BMC Systems Biology'' <u>11</u>:117 (2017) [http://doi.org/10.1186/s12918-017-0483-4 CrossRef]
 * <span class="pmbm">Kochańczyk M</span>, <span class="pmbm">Kocieniewski P</span>, <span class="nopmbm">Kozłowska E</span>, <span class="pmbm">Jaruszewicz-Błońska J</span>, <span class="nopmbm">Sparta B</span>, <span class="nopmbm">Pargett&nbsp;M</span>, <span class="nopmbm">Albeck JG</span>, <span class="nopmbm">Hlavacek WS</span>, <span class="pmbm">Lipniacki T</span>. '''Relaxation oscillations and hierarchy of feedbacks in MAPK signaling''', ''Sci Rep'' <u>6</u>:38244 (2017) [http://www.ncbi.nlm.nih.gov/pubmed/28045041 PubMed] [http://dx.doi.org/10.1038/srep38244 CrossRef] | [http://www.nature.com/articles/srep38244.pdf PDF] [http://pmbm.ippt.pan.pl/publications/supplementary/Kochanczyk-2017-SciRep-SuppInfo.pdf SuppInfo-PDF] [http://pmbm.ippt.pan.pl/publications/supplementary/Kochanczyk-2017-SciRep-SuppCodeBionetgen-UPDATED.zip SuppCode-BNG] [http://pmbm.ippt.pan.pl/publications/supplementary/Kochanczyk-2017-SciRep-SuppCodeMatlabMatcont.zip SuppCode-MatCont] [http://pmbm.ippt.pan.pl/publications/supplementary/Kochanczyk-2017-SciRep-SuppCodeBionetgenNoisyEGFR.zip SuppCode-BNG-noisy] [http://pmbm.ippt.pan.pl/publications/supplementary/Kochanczyk-2017-SciRep-SuppCodeComsol.zip SuppCode-Comsol] [http://pmbm.ippt.pan.pl/publications/supplementary/Kochanczyk-2017-SciRep-Movie.mp4 SuppMovie]