Zbigniew Korwek: Difference between revisions

Latest revision as of 17:03, 14 September 2024

Ph.D., Assistant Professor

Contact

e-mail at ippt.pan.pl: zkorwek
tel.: +48 22 8261280 ext. 326
room: 221

Institute of Fundamental Technological Research
Polish Academy of Sciences
Pawińskiego 5B, 02-106 Warsaw, Poland

Publications

Prus W, Grabowski F, Koza P, Korwek Z, Czerkies M, Kochańczyk M, Lipniacki T. Type III interferons suppress influenza A virus infection independently of STAT activation by triggering cell death (submitted) bioRxiv

Korwek Z^☯, Czerkies M^☯, Jaruszewicz-Błońska J^☯, Prus W, Kosiuk I, Kochańczyk M^☯, Lipniacki T. Nonself RNA rewires IFN-β signaling: A mathematical model of the innate immune response, Sci Signal 16(815):eabq1173 (2023) PubMed CrossRef | FullText bioRxiv

Grabowski F, Kochańczyk M, Korwek Z, Czerkies M, Prus W, Lipniacki T. Antagonism between viral infection and innate immunity at the single-cell level, PLOS Pathog 19(9):e1011597 (2023) PubMed CrossRef | bioRxiv Code Data

Czerkies M, Kochańczyk M, Korwek Z, Prus W, Lipniacki T. Respiratory syncytial virus protects bystander cells against influenza A virus infection by triggering secretion of type I and type III interferons, J Virol 96:22 e01341-22 (2022) PubMed CrossRef | bioRxiv

Czerkies M^☯, Korwek Z^☯, Prus W^☯, Kochańczyk M^☯, Jaruszewicz-Błońska J, Tudelska K, Błoński S, Kimmel M, Brasier AR, Lipniacki T. Cell fate in antiviral response arises in the crosstalk of IRF, NF-κB and JAK/STAT pathways, Nat Commun 9:493 (2018) PubMed CrossRef | PDF SuppInfo-PDF SuppData SuppMovies SuppCode

Tudelska K, Markiewicz J, Kochańczyk M, Czerkies M, Prus W, Korwek Z, Abdi A, Błoński S, Kaźmierczak B, Lipniacki T. Information processing in the NF-κB pathway, Scientific Reports 7:15926 (2017) PubMed CrossRef | PDF SuppInfo-PDF SuppCode-BNGL SuppCode-Py

Kijewska M, Kocyk M, Kloss M, Stępniak K, Korwek Z, Polakowska R, Dąbrowski M, Gieryng A, Wojtas B, Ciechomska IA, Kamińska B. The embryonic type of SPP1 transcriptional regulation is re-activated in glioblastoma, Oncotarget 8:16340–55 (2017) PubMed CrossRef

Korwek Z^☯, Tudelska K^☯, Nałęcz-Jawecki P^☯, Czerkies M^☯, Prus W, Markiewicz J, Kochańczyk M, Lipniacki T. Importins promote high-frequency NF-κB oscillations increasing information channel capacity, Biol Direct 11:61 (2016) PubMed CrossRef | PDF Scheme-PDF SuppModelInfo-PDF SuppModelCode-BNGL SuppFigs-PDF SuppImages-ZIP

Alster O, Bielak-Zmijewska A, Mosieniak G, Moreno-Villanueva M, Dudka-Ruszkowska W, Wojtala A, Kusio-Kobiałka M, Korwek Z, Burkle A, Piwocka K, Siwicki JK, Sikora E. The role of nibrin in doxorubicin-induced apoptosis and cell senescence in Nijmegen breakage syndrome patients lymphocytes, PLOS One 9(8):e104964 (2014) PubMed CrossRef

Korwek Z, Alster O. Rola szlaku indukowanego uszkodzeniami DNA w apoptozie i starzeniu komórkowym [The role of the DNA damage response in apoptosis and cell senescence], Postepy Biochem 60(2):248–62 (2014) PubMed | PDF

Alster O, Korwek Z. Znaczniki starzenia komórkowego [Markers of cellular senescence], Postepy Biochem 60(2):138-46 (2014) PubMed | PDF

Bielak-Zmijewska A, Wnuk M, Przybylska D, Grabowska W, Lewinska A, Alster O, Korwek Z, Cmoch A, Myszka A, Pikula S, Mosieniak G, Sikora E. A comparison of replicative senescence and doxorubicin-induced premature senescence of vascular smooth muscle cells isolated from human aorta, Biogerontology 15(1):47–64 (2014, e-pub 2013) PubMed CrossRef

Korwek Z, Bielak-Zmijewska A, Mosieniak G, Alster O, Moreno-Villanueva M, Burkle A, Sikora E. DNA damage-independent apoptosis induced by curcumin in normal resting human T cells and leukaemic Jurkat cells, Mutagenesis 28(4):411–416 (2013) PubMed CrossRef

Korwek Z, Sewastianik T, Bielak-Zmijewska A, Mosieniak G, Alster O, Moreno-Villaneuva M, Burkle A, Sikora E. Inhibition of ATM blocks the etoposide-induced DNA damage response and apoptosis of resting human T cells, DNA Repair 11(11):864–873 (2012) PubMed CrossRef

@@ Line 14: / Line 14: @@
 ===Publications===
+* <span class="pmbm">Prus&nbsp;W</span>, <span class="pmbm">Grabowski&nbsp;F</span>, <span class="pmbm">Koza&nbsp;P</span>, <span class="pmbm">Korwek&nbsp;Z</span>, <span class="pmbm">Czerkies&nbsp;M</span>, <span class="pmbm">Kochańczyk&nbsp;M</span>, <span class="pmbm">Lipniacki&nbsp;T</span>. '''Type III interferons suppress influenza A virus infection independently of STAT activation by triggering cell death''' (submitted) [https://doi.org/10.1101/2024.09.09.612051 bioRxiv]
-* <span class="pmbm">Czerkies M</span>, <span class="pmbm">Korwek Z</span>, <span class="pmbm">Prus W</span>, <span class="pmbm">Kochańczyk M</span>, <span class="pmbm">Jaruszewicz-Błońska J</span>, <span class="pmbm">Tudelska K</span>, <span class="pmbm">Błoński S</span>, <span class="nopmbm">Kimmel M</span>, <span class="nopmbm">Brasier AR</span>, <span class="pmbm">Lipniacki T</span>. '''Cell fate in antiviral response is decided in the crosstalk of the IRF, NF-κB and JAK/STAT pathways''', ''Nat&nbsp;Commun'' (accepted)
+* <span class="pmbm">Korwek&nbsp;Z<sup>☯</sup></span>, <span class="pmbm">Czerkies&nbsp;M<sup>☯</sup></span>, <span class="pmbm">Jaruszewicz-Błońska&nbsp;J<sup>☯</sup></span>, <span class="pmbm">Prus&nbsp;W</span>, <span class="pmbm">Kosiuk&nbsp;I</span>, <span class="pmbm">Kochańczyk&nbsp;M<sup>☯</sup></span>, <span class="pmbm">Lipniacki&nbsp;T</span>. '''Nonself RNA rewires IFN-β signaling: A mathematical model of the innate immune response''', ''Sci&nbsp;Signal'' <u>16</u>(815):eabq1173 (2023) [https://pubmed.ncbi.nlm.nih.gov/38085817 PubMed] [https://doi.org/10.1126/scisignal.abq1173 CrossRef] | [{{SERVER}}/publications/Korwek-2023-SciSignal.pdf FullText] [https://doi.org/10.1101/2022.01.30.478391 bioRxiv]
+* <span class="pmbm">Grabowski&nbsp;F</span>, <span class="pmbm">Kochańczyk&nbsp;M</span>, <span class="pmbm">Korwek&nbsp;Z</span>, <span class="pmbm">Czerkies&nbsp;M</span>, <span class="pmbm">Prus&nbsp;W</span>, <span class="pmbm">Lipniacki&nbsp;T</span>. '''Antagonism between viral infection and innate immunity at the single-cell level''', ''PLOS&nbsp;Pathog'' <u>19</u>(9):e1011597 (2023) [https://pubmed.ncbi.nlm.nih.gov/37669278 PubMed] [https://doi.org/10.1371/journal.ppat.1011597 CrossRef] | [https://doi.org/10.1101/2022.11.18.517110 bioRxiv] [https://github.com/grfrederic/visavis Code] [https://doi.org/10.5281/zenodo.7428925 Data]
+*  <span class="author">Czerkies&nbsp;M</span>, <span class="author">Kochańczyk&nbsp;M</span>, <span class="author">Korwek&nbsp;Z</span>, <span class="author">Prus&nbsp;W</span>, <span class="author">Lipniacki&nbsp;T</span>. '''Respiratory syncytial virus protects bystander cells against influenza A virus infection by triggering secretion of type I and type III interferons''', ''J&nbsp;Virol'' <u>96</u>:22 e01341-22 (2022) [https://pubmed.ncbi.nlm.nih.gov/36326278 PubMed] [https://doi.org/10.1128/jvi.01341-22 CrossRef] | [https://doi.org/10.1101/2021.10.11.463877 bioRxiv]
+* <span class="pmbm">Czerkies M<sup>☯</sup></span>, <span class="pmbm">Korwek Z<sup>☯</sup></span>, <span class="pmbm">Prus W<sup>☯</sup></span>, <span class="pmbm">Kochańczyk M<sup>☯</sup></span>, <span class="pmbm">Jaruszewicz-Błońska J</span>, <span class="pmbm">Tudelska K</span>, <span class="pmbm">Błoński S</span>, <span class="nopmbm">Kimmel M</span>, <span class="nopmbm">Brasier AR</span>, <span class="pmbm">Lipniacki T</span>. '''Cell fate in antiviral response arises in the crosstalk of IRF, NF-κB and JAK/STAT pathways''', ''Nat Commun'' <u>9</u>:493 (2018) [http://www.ncbi.nlm.nih.gov/pubmed/29402958 PubMed] [http://dx.doi.org/10.1038/s41467-017-02640-8 CrossRef] | [http://pmbm.ippt.pan.pl/publications/Czerkies-2018-NatCommun.pdf PDF] [http://pmbm.ippt.pan.pl/publications/supplementary/Czerkies-2018-NatCommun-SuppInfo.pdf SuppInfo-PDF] [http://pmbm.ippt.pan.pl/publications/supplementary/Czerkies-2018-NatCommun-AllSuppData.zip SuppData] [http://pmbm.ippt.pan.pl/publications/supplementary/Czerkies-2018-NatCommun-AllMovies.zip SuppMovies] [http://pmbm.ippt.pan.pl/publications/supplementary/Czerkies-2018-NatCommun-ModelCode.zip SuppCode]
 * <span class="pmbm">Tudelska K</span>, <span class="pmbm">Markiewicz J</span>, <span class="pmbm">Kochańczyk M</span>, <span class="pmbm">Czerkies M</span>, <span class="pmbm">Prus W</span>, <span class="pmbm">Korwek Z</span>, <span class="nopmbm">Abdi A</span>, <span class="pmbm">Błoński S</span>, <span class="pmbm">Kaźmierczak B</span>, <span class="pmbm">Lipniacki T</span>. '''Information processing in the NF-κB pathway''', ''Scientific&nbsp;Reports'' <u>7</u>:15926 (2017) [http://www.ncbi.nlm.nih.gov/pubmed/29162874 PubMed] [http://doi.org/10.1038/s41598-017-16166-y CrossRef] | [http://www.nature.com/articles/s41598-017-16166-y.pdf PDF] [http://pmbm.ippt.pan.pl/publications/supplementary/Tudelska-2017-SciRep-SuppInfo.pdf SuppInfo-PDF] [http://pmbm.ippt.pan.pl/publications/supplementary/Tudelska-2017-SciRep-SuppDataset1.zip SuppCode-BNGL] [http://pmbm.ippt.pan.pl/publications/supplementary/Tudelska-2017-SciRep-SuppDataset2.zip SuppCode-Py]
@@ Line 21: / Line 28: @@
 * <span class="nopmbm">Kijewska M</span>, <span class="nopmbm">Kocyk M</span>, <span class="nopmbm">Kloss M</span>, <span class="nopmbm">Stępniak K</span>, <span class="nopmbm">Korwek Z</span>, <span class="nopmbm">Polakowska R</span>, <span class="nopmbm">Dąbrowski&nbsp;M</span>, <span class="nopmbm">Gieryng&nbsp;A</span>, <span class="nopmbm">Wojtas B</span>, <span class="nopmbm">Ciechomska IA</span>, <span class="nopmbm">Kamińska B</span>. '''The embryonic type of <i>SPP1</i> transcriptional regulation is re-activated in glioblastoma''', ''Oncotarget'' <u>8</u>:16340–55 (2017) [http://www.ncbi.nlm.nih.gov/pubmed/28030801 PubMed] [http://dx.doi.org/10.18632/oncotarget.14092 CrossRef]
-* <span class="pmbm">Korwek Z<sup>=</sup></span>, <span class="pmbm">Tudelska K<sup>=</sup></span>, <span class="nopmbm">Nałęcz-Jawecki P<sup>=</sup></span>, <span class="pmbm">Czerkies M<sup>=</sup></span>, <span class="pmbm">Prus W</span>, <span class="pmbm">Markiewicz J</span>, <span class="pmbm">Kochańczyk&nbsp;M</span>, <span class="pmbm">Lipniacki T</span>. '''Importins promote high-frequency NF-&kappa;B oscillations increasing information channel capacity''', ''Biol Direct'' <u>11</u>:61 (2016) [http://www.ncbi.nlm.nih.gov/pubmed/27835978 PubMed] [http://dx.doi.org/10.1186/s13062-016-0164-z CrossRef] | [http://pmbm.ippt.pan.pl/publications/Korwek-2016-BiolDirect.pdf PDF] [http://pmbm.ippt.pan.pl/publications/supplementary/Korwek-2016-BiolDirect-Fig1d-HiRes.pdf Scheme-PDF] [http://pmbm.ippt.pan.pl/publications/supplementary/Korwek-2016-BiolDirect-AddFile1-ModelDescription.pdf SuppModelInfo-PDF] [http://pmbm.ippt.pan.pl/publications/supplementary/Korwek-2016-BiolDirect-AddFile2-NFkBImportinsModel.bngl SuppModelCode-BNGL] [http://pmbm.ippt.pan.pl/publications/supplementary/Korwek-2016-BiolDirect-AddFile3-SuppFigs-S1-to-S7.pdf SuppFigs-PDF] [http://pmbm.ippt.pan.pl/publications/supplementary/Korwek-2016-BiolDirect-AddFiles4567-SuppImages.zip SuppImages-ZIP]
+* <span class="pmbm">Korwek Z<sup>☯</sup></span>, <span class="pmbm">Tudelska K<sup>☯</sup></span>, <span class="nopmbm">Nałęcz-Jawecki P<sup>☯</sup></span>, <span class="pmbm">Czerkies M<sup>☯</sup></span>, <span class="pmbm">Prus W</span>, <span class="pmbm">Markiewicz J</span>, <span class="pmbm">Kochańczyk&nbsp;M</span>, <span class="pmbm">Lipniacki T</span>. '''Importins promote high-frequency NF-&kappa;B oscillations increasing information channel capacity''', ''Biol Direct'' <u>11</u>:61 (2016) [http://www.ncbi.nlm.nih.gov/pubmed/27835978 PubMed] [http://dx.doi.org/10.1186/s13062-016-0164-z CrossRef] | [http://pmbm.ippt.pan.pl/publications/Korwek-2016-BiolDirect.pdf PDF] [http://pmbm.ippt.pan.pl/publications/supplementary/Korwek-2016-BiolDirect-Fig1d-HiRes.pdf Scheme-PDF] [http://pmbm.ippt.pan.pl/publications/supplementary/Korwek-2016-BiolDirect-AddFile1-ModelDescription.pdf SuppModelInfo-PDF] [http://pmbm.ippt.pan.pl/publications/supplementary/Korwek-2016-BiolDirect-AddFile2-NFkBImportinsModel.bngl SuppModelCode-BNGL] [http://pmbm.ippt.pan.pl/publications/supplementary/Korwek-2016-BiolDirect-AddFile3-SuppFigs-S1-to-S7.pdf SuppFigs-PDF] [http://pmbm.ippt.pan.pl/publications/supplementary/Korwek-2016-BiolDirect-AddFiles4567-SuppImages.zip SuppImages-ZIP]
 * <span class="nopmbm">Alster O</span>, <span class="nopmbm">Bielak-Zmijewska A</span>, <span class="nopmbm">Mosieniak G</span>, <span class="nopmbm">Moreno-Villanueva M</span>, <span class="nopmbm">Dudka-Ruszkowska W</span>, <span class="nopmbm">Wojtala&nbsp;A</span>, <span class="nopmbm">Kusio-Kobiałka M</span>, <span class="nopmbm">Korwek Z</span>, <span class="nopmbm">Burkle A</span>, <span class="nopmbm">Piwocka K</span>, <span class="nopmbm">Siwicki JK</span>, <span class="nopmbm">Sikora E</span>. '''The&nbsp;role of nibrin in doxorubicin-induced apoptosis and cell senescence in Nijmegen breakage syndrome patients lymphocytes''', ''PLOS One'' <u>9</u>(8):e104964 (2014) [http://www.ncbi.nlm.nih.gov/pubmed/25119968 PubMed] [http://dx.doi.org/10.1371/journal.pone.0104964 CrossRef]