Wiktor Prus: Difference between revisions

From Laboratory of Modeling in Biology and Medicine
Jump to: navigation, search
mNo edit summary
mNo edit summary
 
(14 intermediate revisions by the same user not shown)
Line 13: Line 13:


===Publications===
===Publications===
* <span class="pmbm">Grabowski&nbsp;F</span>, <span class="pmbm">Kochańczyk&nbsp;M</span>, <span class="pmbm">Korwek&nbsp;Z</span>, <span class="pmbm">Czerkies&nbsp;M</span>, <span class="pmbm">Prus&nbsp;W</span>, <span class="pmbm">Lipniacki&nbsp;T</span>. '''Antagonism between viral infection and innate immunity at the single-cell level''' (submitted) [https://doi.org/10.1101/2022.11.18.517110 bioRxiv]
* <span class="pmbm">Prus&nbsp;W</span>, <span class="pmbm">Grabowski&nbsp;F</span>, <span class="pmbm">Koza&nbsp;P</span>, <span class="pmbm">Korwek&nbsp;Z</span>, <span class="pmbm">Czerkies&nbsp;M</span>, <span class="pmbm">Kochańczyk&nbsp;M</span>, <span class="pmbm">Lipniacki&nbsp;T</span>. '''Type III interferons suppress influenza A virus infection independently of STAT activation by triggering cell death''' (submitted) [https://doi.org/10.1101/2024.09.09.612051 bioRxiv]


* <span class="pmbm">Jaruszewicz-Błońska&nbsp;J</span>, <span class="nopmbm">Kosiuk&nbsp;I</span>, <span class="pmbm">Prus&nbsp;W</span>, <span class="pmbm">Lipniacki&nbsp;T</span>. '''A plausible identifiable model of the canonical NF-κB signaling pathway''' (submitted) [https://doi.org/10.1101/2022.06.09.495460 bioRxiv]
* <span class="pmbm">Korwek&nbsp;Z</span>, <span class="pmbm">Czerkies&nbsp;M</span>, <span class="pmbm">Jaruszewicz-Błońska&nbsp;J</span>, <span class="pmbm">Prus&nbsp;W</span>, <span class="pmbm">Kosiuk&nbsp;I</span>, <span class="pmbm">Kochańczyk&nbsp;M</span>, <span class="pmbm">Lipniacki&nbsp;T</span>. '''Nonself RNA rewires IFN-β signaling: A mathematical model of the innate immune response''', ''Sci&nbsp;Signal'' <u>16</u>(815):eabq1173 (2023) [https://pubmed.ncbi.nlm.nih.gov/38085817 PubMed] [https://doi.org/10.1126/scisignal.abq1173 CrossRef] | [{{SERVER}}/publications/Korwek-2023-SciSignal.pdf FullText] [https://doi.org/10.1101/2022.01.30.478391 bioRxiv]


* <span class="pmbm">Korwek&nbsp;Z<sup>☯</sup></span>, <span class="pmbm">Czerkies&nbsp;M<sup>☯</sup></span>, <span class="pmbm">Jaruszewicz-Błońska&nbsp;J<sup>☯</sup></span>, <span class="pmbm">Prus&nbsp;W</span>, <span class="pmbm">Kosiuk&nbsp;I</span>, <span class="pmbm">Kochańczyk&nbsp;M<sup>☯</sup></span>, <span class="pmbm">Lipniacki&nbsp;T</span>. '''Non-self RNA rewires IFNβ signaling: A mathematical model of the innate immune response''' (submitted) [https://doi.org/10.1101/2022.01.30.478391 bioRxiv]
* <span class="pmbm">Grabowski&nbsp;F</span>, <span class="pmbm">Kochańczyk&nbsp;M</span>, <span class="pmbm">Korwek&nbsp;Z</span>, <span class="pmbm">Czerkies&nbsp;M</span>, <span class="pmbm">Prus&nbsp;W</span>, <span class="pmbm">Lipniacki&nbsp;T</span>. '''Antagonism between viral infection and innate immunity at the single-cell level''', ''PLOS&nbsp;Pathog'' <u>19</u>(9):e1011597 (2023) [https://doi.org/10.1371/journal.ppat.1011597 CrossRef] [https://pubmed.ncbi.nlm.nih.gov/37669278 PubMed] | [https://doi.org/10.1101/2022.11.18.517110 bioRxiv] [https://github.com/grfrederic/visavis Code] [https://doi.org/10.5281/zenodo.7428925 Data]


* <span class="author">Czerkies&nbsp;M</span>, <span class="author">Kochańczyk&nbsp;M</span>, <span class="author">Korwek&nbsp;Z</span>, <span class="author">Prus&nbsp;W</span>, <span class="author">Lipniacki&nbsp;T</span>. '''Respiratory syncytial virus protects bystander cells against influenza A virus infection by triggering secretion of type I and type III interferons''', ''J&nbsp;Virol'' (2022) <u>96</u>:22 e01341-22 [https://doi.org/10.1128/jvi.01341-22 CrossRef] [https://doi.org/10.1101/2021.10.11.463877 bioRxiv]
* <span class="pmbm">Jaruszewicz-Błońska&nbsp;J</span>, <span class="pmbm">Kosiuk&nbsp;I</span>, <span class="pmbm">Prus&nbsp;W</span>, <span class="pmbm">Lipniacki&nbsp;T</span>. '''A plausible identifiable model of the canonical NF-κB signaling pathway''', ''PLOS One'' <u>8</u>(6):e0286416 (2023) [https://pubmed.ncbi.nlm.nih.gov/37267242 PubMed] [https://doi.org/10.1371/journal.pone.0286416 CrossRef] [https://doi.org/10.1101/2022.06.09.495460 bioRxiv]


* <span class="pmbm">Czerkies M<sup>☯</sup></span>, <span class="pmbm">Korwek Z<sup>☯</sup></span>, <span class="pmbm">Prus W<sup>☯</sup></span>, <span class="pmbm">Kochańczyk M<sup>☯</sup></span>, <span class="pmbm">Jaruszewicz-Błońska J</span>, <span class="pmbm">Tudelska K</span>, <span class="pmbm">Błoński S</span>, <span class="nopmbm">Kimmel M</span>, <span class="nopmbm">Brasier AR</span>, <span class="pmbm">Lipniacki T</span>. '''Cell fate in antiviral response arises in the crosstalk of IRF, NF-κB and JAK/STAT pathways''', ''Nat Commun'' <u>9</u>:493 (2018) [http://www.ncbi.nlm.nih.gov/pubmed/29402958 PubMed] [http://dx.doi.org/10.1038/s41467-017-02640-8 CrossRef] | [http://pmbm.ippt.pan.pl/publications/Czerkies-2018-NatCommun.pdf PDF] [http://pmbm.ippt.pan.pl/publications/supplementary/Czerkies-2018-NatCommun-SuppInfo.pdf SuppInfo-PDF] [http://pmbm.ippt.pan.pl/publications/supplementary/Czerkies-2018-NatCommun-AllSuppData.zip SuppData] [http://pmbm.ippt.pan.pl/publications/supplementary/Czerkies-2018-NatCommun-AllMovies.zip SuppMovies] [http://pmbm.ippt.pan.pl/publications/supplementary/Czerkies-2018-NatCommun-ModelCode.zip SuppCode]
*  <span class="author">Czerkies&nbsp;M</span>, <span class="author">Kochańczyk&nbsp;M</span>, <span class="author">Korwek&nbsp;Z</span>, <span class="author">Prus&nbsp;W</span>, <span class="author">Lipniacki&nbsp;T</span>. '''Respiratory syncytial virus protects bystander cells against influenza A virus infection by triggering secretion of type I and type III interferons''', ''J&nbsp;Virol'' <u>96</u>:22 e01341-22 (2022) [https://pubmed.ncbi.nlm.nih.gov/36326278 PubMed] [https://doi.org/10.1128/jvi.01341-22 CrossRef] [https://doi.org/10.1101/2021.10.11.463877 bioRxiv]
 
* <span class="pmbm">Czerkies&nbsp;M<sup>☯</sup></span>, <span class="pmbm">Korwek&nbsp;Z<sup>☯</sup></span>, <span class="pmbm">Prus&nbsp;W<sup>☯</sup></span>, <span class="pmbm">Kochańczyk&nbsp;M<sup>☯</sup></span>, <span class="pmbm">Jaruszewicz-Błońska&nbsp;J</span>, <span class="pmbm">Tudelska&nbsp;K</span>, <span class="pmbm">Błoński&nbsp;S</span>, <span class="nopmbm">Kimmel&nbsp;M</span>, <span class="nopmbm">Brasier&nbsp;AR</span>, <span class="pmbm">Lipniacki&nbsp;T</span>. '''Cell fate in antiviral response arises in the crosstalk of IRF, NF-κB and JAK/STAT pathways''', ''Nat Commun'' <u>9</u>:493 (2018) [http://www.ncbi.nlm.nih.gov/pubmed/29402958 PubMed] [http://dx.doi.org/10.1038/s41467-017-02640-8 CrossRef] | [http://pmbm.ippt.pan.pl/publications/Czerkies-2018-NatCommun.pdf PDF] [http://pmbm.ippt.pan.pl/publications/supplementary/Czerkies-2018-NatCommun-SuppInfo.pdf SuppInfo-PDF] [http://pmbm.ippt.pan.pl/publications/supplementary/Czerkies-2018-NatCommun-AllSuppData.zip SuppData] [http://pmbm.ippt.pan.pl/publications/supplementary/Czerkies-2018-NatCommun-AllMovies.zip SuppMovies] [http://pmbm.ippt.pan.pl/publications/supplementary/Czerkies-2018-NatCommun-ModelCode.zip SuppCode]


* <span class="pmbm">Tudelska K</span>, <span class="pmbm">Markiewicz J</span>, <span class="pmbm">Kochańczyk M</span>, <span class="pmbm">Czerkies M</span>, <span class="pmbm">Prus W</span>, <span class="pmbm">Korwek Z</span>, <span class="nopmbm">Abdi A</span>, <span class="pmbm">Błoński S</span>, <span class="pmbm">Kaźmierczak B</span>, <span class="pmbm">Lipniacki T</span>. '''Information processing in the NF-κB pathway''', ''Scientific&nbsp;Reports'' <u>7</u>:15926 (2017) [http://www.ncbi.nlm.nih.gov/pubmed/29162874 PubMed] [http://doi.org/10.1038/s41598-017-16166-y CrossRef] | [http://www.nature.com/articles/s41598-017-16166-y.pdf PDF] [http://pmbm.ippt.pan.pl/publications/supplementary/Tudelska-2017-SciRep-SuppInfo.pdf SuppInfo-PDF] [http://pmbm.ippt.pan.pl/publications/supplementary/Tudelska-2017-SciRep-SuppDataset1.zip SuppCode-BNGL] [http://pmbm.ippt.pan.pl/publications/supplementary/Tudelska-2017-SciRep-SuppDataset2.zip SuppCode-Py]
* <span class="pmbm">Tudelska K</span>, <span class="pmbm">Markiewicz J</span>, <span class="pmbm">Kochańczyk M</span>, <span class="pmbm">Czerkies M</span>, <span class="pmbm">Prus W</span>, <span class="pmbm">Korwek Z</span>, <span class="nopmbm">Abdi A</span>, <span class="pmbm">Błoński S</span>, <span class="pmbm">Kaźmierczak B</span>, <span class="pmbm">Lipniacki T</span>. '''Information processing in the NF-κB pathway''', ''Scientific&nbsp;Reports'' <u>7</u>:15926 (2017) [http://www.ncbi.nlm.nih.gov/pubmed/29162874 PubMed] [http://doi.org/10.1038/s41598-017-16166-y CrossRef] | [http://www.nature.com/articles/s41598-017-16166-y.pdf PDF] [http://pmbm.ippt.pan.pl/publications/supplementary/Tudelska-2017-SciRep-SuppInfo.pdf SuppInfo-PDF] [http://pmbm.ippt.pan.pl/publications/supplementary/Tudelska-2017-SciRep-SuppDataset1.zip SuppCode-BNGL] [http://pmbm.ippt.pan.pl/publications/supplementary/Tudelska-2017-SciRep-SuppDataset2.zip SuppCode-Py]

Latest revision as of 17:02, 14 September 2024

Ph.D., Assistant Professor
Wiktor Prus

Contact

e-mail at ippt.pan.pl: <email>wprus</email>
tel.: +48 22 8261280 ext. 448
room: 321

Institute of Fundamental Technological Research
Polish Academy of Sciences
Pawińskiego 5B, 02-106 Warsaw, Poland


Publications

  • Prus W, Grabowski F, Koza P, Korwek Z, Czerkies M, Kochańczyk M, Lipniacki T. Type III interferons suppress influenza A virus infection independently of STAT activation by triggering cell death (submitted) bioRxiv
  • Korwek Z, Czerkies M, Jaruszewicz-Błońska J, Prus W, Kosiuk I, Kochańczyk M, Lipniacki T. Nonself RNA rewires IFN-β signaling: A mathematical model of the innate immune response, Sci Signal 16(815):eabq1173 (2023) PubMed CrossRef | FullText bioRxiv
  • Grabowski F, Kochańczyk M, Korwek Z, Czerkies M, Prus W, Lipniacki T. Antagonism between viral infection and innate immunity at the single-cell level, PLOS Pathog 19(9):e1011597 (2023) CrossRef PubMed | bioRxiv Code Data
  • Jaruszewicz-Błońska J, Kosiuk I, Prus W, Lipniacki T. A plausible identifiable model of the canonical NF-κB signaling pathway, PLOS One 8(6):e0286416 (2023) PubMed CrossRef bioRxiv
  • Czerkies M, Kochańczyk M, Korwek Z, Prus W, Lipniacki T. Respiratory syncytial virus protects bystander cells against influenza A virus infection by triggering secretion of type I and type III interferons, J Virol 96:22 e01341-22 (2022) PubMed CrossRef bioRxiv
  • Czerkies M, Korwek Z, Prus W, Kochańczyk M, Jaruszewicz-Błońska J, Tudelska K, Błoński S, Kimmel M, Brasier AR, Lipniacki T. Cell fate in antiviral response arises in the crosstalk of IRF, NF-κB and JAK/STAT pathways, Nat Commun 9:493 (2018) PubMed CrossRef | PDF SuppInfo-PDF SuppData SuppMovies SuppCode
  • Góral A, Bieganowski P, Prus W, Krzemień-Ojak Ł, Kądziołka B, Fabczak H, Filipek A. Calcyclin Binding Protein/Siah-1 Interacting Protein is a Hsp90 binding chaperone, PLOS One 1(6):e0156507 (2016) PubMed CrossRef
  • Prus W, Zabka M, Bieganowski P, Filipek A. Nuclear translocation of Sgt1 depends on its phosphorylation state, Int J Biochem Cell Biol 43(12):1747–1753 (2011) PubMed CrossRef
  • Prus W, Filipek A. S100A6 mediates nuclear translocation of Sgt1: a heat shock-regulated protein, Amino acids 41(4):781-787 (2011) PubMed CrossRef
  • Zabka M, Lesniak W, Prus W, Kuznicki J, Filipek A. Sgt1 has co-chaperone properties and is up-regulated by heat shock, Biochem Biophys Res Commun 370(1):179–183 (2008) PubMed CrossRef