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====Recent publications of our Lab:<br style="line-height: 10%; margin-bottom:5px"/>==== | ====Recent publications of our Lab:<br style="line-height: 10%; margin-bottom:5px"/>==== | ||
* '''Super-spreading events initiated the exponential growth phase of COVID-19 with <i>R</i><sub>0</sub>higher than initially estimated'''<br/><span class="author">Kochańczyk M</span>, <span class="author">Grabowski F</span>, <span class="author">Lipniacki T</span><br/>''Royal Society Open Science'' (2020)<br/> [https://doi.org/10.1098/rsos.200786 CrossRef] | [https://royalsocietypublishing.org/doi/pdf/10.1098/rsos.200786 PDF] [https://royalsocietypublishing.org/doi/suppl/10.1098/rsos.200786 SuppInfo] [https://royalsocietypublishing.org/action/downloadSupplement?doi=10.1098/rsos.200786&file=rsos200786_review_history.pdf Correspondence] | |||
* '''Quantitative determination of mechanical stability in the novel coro-navirus spike protein'''<br style="line-height: 50%; margin-bottom:10px"/><span class="pmbm">Moreira RA</span>, <span class="nopmbm">Chwastyk M</span>, <span class="nopmbm">Baker JL</span>, <span class="nopmbm">Guzman HV</span>, <span class="pmbm">Poma AB</span><br style="line-height: 50%; margin-bottom:10px"/>''Nanoscale'' (accepted) [https://doi.org/10.1039/D0NR03969A CrossRef] | * '''Quantitative determination of mechanical stability in the novel coro-navirus spike protein'''<br style="line-height: 50%; margin-bottom:10px"/><span class="pmbm">Moreira RA</span>, <span class="nopmbm">Chwastyk M</span>, <span class="nopmbm">Baker JL</span>, <span class="nopmbm">Guzman HV</span>, <span class="pmbm">Poma AB</span><br style="line-height: 50%; margin-bottom:10px"/>''Nanoscale'' (accepted) [https://doi.org/10.1039/D0NR03969A CrossRef] | ||
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* '''The limited information capacity of cross-reactive sensors drives the evolutionary<br/>expansion of signaling'''<br style="line-height: 50%; margin-bottom:10px"/><span class="pmbm">Komorowski M</span>, <span class="nopmbm">Tawfik DS</span>.<br style="line-height: 50%; margin-bottom:10px"/>''Cell Systems'' <u>8</u>(1):76–85.e6 (2019) [https://www.ncbi.nlm.nih.gov/pubmed/30660612 PubMed] [http://doi.org/10.1016/j.cels.2018.12.006 CrossRef]<br style="line-height: 100%; margin-bottom:16px"> | * '''The limited information capacity of cross-reactive sensors drives the evolutionary<br/>expansion of signaling'''<br style="line-height: 50%; margin-bottom:10px"/><span class="pmbm">Komorowski M</span>, <span class="nopmbm">Tawfik DS</span>.<br style="line-height: 50%; margin-bottom:10px"/>''Cell Systems'' <u>8</u>(1):76–85.e6 (2019) [https://www.ncbi.nlm.nih.gov/pubmed/30660612 PubMed] [http://doi.org/10.1016/j.cels.2018.12.006 CrossRef]<br style="line-height: 100%; margin-bottom:16px"> | ||
* '''Cell fate in antiviral response arises in the crosstalk of IRF, NF-κB and JAK/STAT pathways'''<br style="line-height: 50%; margin-bottom:10px"/><span class="pmbm">Czerkies M</span>, <span class="pmbm">Korwek Z</span>, <span class="pmbm">Prus W</span>, <span class="pmbm">Kochańczyk M</span>, <span class="pmbm">Jaruszewicz-Błońska J</span>, <span class="pmbm">Tudelska K</span>, <span class="pmbm">Błoński S</span>, <span class="nopmbm">Kimmel M</span>, <span class="nopmbm">Brasier AR</span>, <span class="pmbm">Lipniacki T</span>.<br style="line-height: 50%; margin-bottom:10px"/>''Nature Communications'' <u>9</u>:493 (2018) [http://www.ncbi.nlm.nih.gov/pubmed/29402958 PubMed] [http://dx.doi.org/10.1038/s41467-017-02640-8 CrossRef] | [http://pmbm.ippt.pan.pl/publications/Czerkies-2018-NatCommun.pdf PDF] [http://pmbm.ippt.pan.pl/publications/supplementary/Czerkies-2018-NatCommun-SuppInfo.pdf SuppInfo-PDF] [http://pmbm.ippt.pan.pl/publications/supplementary/Czerkies-2018-NatCommun-AllSuppData.zip SuppData] [http://pmbm.ippt.pan.pl/publications/supplementary/Czerkies-2018-NatCommun-AllMovies.zip SuppMovies] [http://pmbm.ippt.pan.pl/publications/supplementary/Czerkies-2018-NatCommun-ModelCode.zip SuppCode]<br style="line-height: 100%; margin-bottom:16px"> | * '''Cell fate in antiviral response arises in the crosstalk of IRF, NF-κB and JAK/STAT pathways'''<br style="line-height: 50%; margin-bottom:10px"/><span class="pmbm">Czerkies M</span>, <span class="pmbm">Korwek Z</span>, <span class="pmbm">Prus W</span>, <span class="pmbm">Kochańczyk M</span>, <span class="pmbm">Jaruszewicz-Błońska J</span>, <span class="pmbm">Tudelska K</span>, <span class="pmbm">Błoński S</span>, <span class="nopmbm">Kimmel M</span>, <span class="nopmbm">Brasier AR</span>, <span class="pmbm">Lipniacki T</span>.<br style="line-height: 50%; margin-bottom:10px"/>''Nature Communications'' <u>9</u>:493 (2018) [http://www.ncbi.nlm.nih.gov/pubmed/29402958 PubMed] [http://dx.doi.org/10.1038/s41467-017-02640-8 CrossRef] | [http://pmbm.ippt.pan.pl/publications/Czerkies-2018-NatCommun.pdf PDF] [http://pmbm.ippt.pan.pl/publications/supplementary/Czerkies-2018-NatCommun-SuppInfo.pdf SuppInfo-PDF] [http://pmbm.ippt.pan.pl/publications/supplementary/Czerkies-2018-NatCommun-AllSuppData.zip SuppData] [http://pmbm.ippt.pan.pl/publications/supplementary/Czerkies-2018-NatCommun-AllMovies.zip SuppMovies] [http://pmbm.ippt.pan.pl/publications/supplementary/Czerkies-2018-NatCommun-ModelCode.zip SuppCode]<br style="line-height: 100%; margin-bottom:16px"> | ||
* '''An information-theoretic framework for deciphering pleiotropic and noisy<br/>biochemical signaling'''<br style="line-height: 50%; margin-bottom:10px"/><span class="pmbm">Jetka T</span>, <span class="pmbm">Nienałtowski K</span>, <span class="nopmbm">Filippi S</span>, <span class="nopmbm">Stumpf MPH</span>, <span class="pmbm">Komorowski M</span>.<br style="line-height: 50%; margin-bottom:10px"/>''Nature Communications'' <u>9</u>:4591 (2018) [http://www.ncbi.nlm.nih.gov/pubmed/30389942 PubMed] [http://dx.doi.org/10.1038/s41467-018-07085-1 CrossRef] | [http://pmbm.ippt.pan.pl/publications/Jetka-2018-NatCommun.pdf PDF] [http://pmbm.ippt.pan.pl/publications/supplementary/Jetka-2018-NatCommun-SuppInfo.pdf SuppInfo-PDF]<br style="line-height: 100%; margin-bottom:16px"> | * '''An information-theoretic framework for deciphering pleiotropic and noisy<br/>biochemical signaling'''<br style="line-height: 50%; margin-bottom:10px"/><span class="pmbm">Jetka T</span>, <span class="pmbm">Nienałtowski K</span>, <span class="nopmbm">Filippi S</span>, <span class="nopmbm">Stumpf MPH</span>, <span class="pmbm">Komorowski M</span>.<br style="line-height: 50%; margin-bottom:10px"/>''Nature Communications'' <u>9</u>:4591 (2018) [http://www.ncbi.nlm.nih.gov/pubmed/30389942 PubMed] [http://dx.doi.org/10.1038/s41467-018-07085-1 CrossRef] | [http://pmbm.ippt.pan.pl/publications/Jetka-2018-NatCommun.pdf PDF] [http://pmbm.ippt.pan.pl/publications/supplementary/Jetka-2018-NatCommun-SuppInfo.pdf SuppInfo-PDF]<br style="line-height: 100%; margin-bottom:16px"> | ||
* '''Single-material organic solar cells based on electrospun fullerene-grafted polythiophene nanofibers'''<br style="line-height: 50%; margin-bottom:10px"/><span class="pmbm">Pierini F</span>, <span class="nopmbm">Lanzi M</span>, <span class="pmbm">Nakielski P</span>, <span class="pmbm">Pawłowska S</span>, <span class="nopmbm">Urbanek O</span>, <span class="pmbm">Zembrzycki K</span>, <span class="pmbm">Kowalewski TA</span>.<br style="line-height: 50%; margin-bottom:10px"/>''Macromolecules'' <u>50</u>(13):4972–81 (2017) [http://dx.doi.org/10.1021/acs.macromol.7b00857 CrossRef]<br style="line-height: 100%; margin-bottom:16px"> | * '''Single-material organic solar cells based on electrospun fullerene-grafted polythiophene nanofibers'''<br style="line-height: 50%; margin-bottom:10px"/><span class="pmbm">Pierini F</span>, <span class="nopmbm">Lanzi M</span>, <span class="pmbm">Nakielski P</span>, <span class="pmbm">Pawłowska S</span>, <span class="nopmbm">Urbanek O</span>, <span class="pmbm">Zembrzycki K</span>, <span class="pmbm">Kowalewski TA</span>.<br style="line-height: 50%; margin-bottom:10px"/>''Macromolecules'' <u>50</u>(13):4972–81 (2017) [http://dx.doi.org/10.1021/acs.macromol.7b00857 CrossRef]<br style="line-height: 100%; margin-bottom:16px"> | ||
Revision as of 08:16, 27 September 2020
Laboratory of Modeling in Biology and Medicine
biophysics · systems biology · bioengineering
 |
Head: |
Recent publications of our Lab:
- Super-spreading events initiated the exponential growth phase of COVID-19 with R0higher than initially estimated
, ,
Royal Society Open Science (2020)
CrossRef | PDF SuppInfo Correspondence
- Quantitative determination of mechanical stability in the novel coro-navirus spike protein
Moreira RA, Chwastyk M, Baker JL, Guzman HV, Poma AB
Nanoscale (accepted) CrossRef
- Ultraviolet light-assisted electrospinning of core–shell fully cross-linked P(NIPAAm-co-NIPMAAm) hydrogel-based nanofibers for thermally-induced drug delivery self-regulation
Pawłowska S, Rinoldi C, Nakielski P, Ziai Y, Urbanek O, Li X, Kowalewski TA, Ding B, Pierini F.
Advanced Materials Interfaces 2000247 (2020) CrossRef | SuppInfo-PDF SuppMovie-MP4 CoverPicture
- Accounting for corner flow unifies the understanding of droplet formation
in microfluidic channels
Korczyk PM, van Steijn V, Blonski S, Zaremba D, Beattie DA, Garstecki P.
Nature Communications 10:2528 (2019) CrossRef | PDF SuppInfo-PDF
- The limited information capacity of cross-reactive sensors drives the evolutionary
expansion of signaling
Komorowski M, Tawfik DS.
Cell Systems 8(1):76–85.e6 (2019) PubMed CrossRef
- Cell fate in antiviral response arises in the crosstalk of IRF, NF-κB and JAK/STAT pathways
Czerkies M, Korwek Z, Prus W, Kochańczyk M, Jaruszewicz-Błońska J, Tudelska K, Błoński S, Kimmel M, Brasier AR, Lipniacki T.
Nature Communications 9:493 (2018) PubMed CrossRef | PDF SuppInfo-PDF SuppData SuppMovies SuppCode
- An information-theoretic framework for deciphering pleiotropic and noisy
biochemical signaling
Jetka T, Nienałtowski K, Filippi S, Stumpf MPH, Komorowski M.
Nature Communications 9:4591 (2018) PubMed CrossRef | PDF SuppInfo-PDF
- Single-material organic solar cells based on electrospun fullerene-grafted polythiophene nanofibers
Pierini F, Lanzi M, Nakielski P, Pawłowska S, Urbanek O, Zembrzycki K, Kowalewski TA.
Macromolecules 50(13):4972–81 (2017) CrossRef
- Traveling waves in a coupled reaction–diffusion and difference model of hematopoiesis
Adimy M, Chekroun A, Kaźmierczak B.
Journal of Differential Equations 262(7):4085–4128 (2017) CrossRef
- The propagation phenomenon of solutions of a parabolic problem on the sphere
Kazmierczak B, Tsai J-C, Bialecki S.
Mathematical Models and Methods in Applied Sciences 28(10):2001–2067 (2018) CrossRef
To learn more on our research, you may read our perspective on regulatory pathway modeling (a book chapter in Polish).
