Publications: Difference between revisions

Revision as of 12:01, 10 February 2023

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Lab-Affiliated Author, External Collaborator

2023

Korwek Z, Czerkies M, Jaruszewicz-Błońska J, Prus W, Kosiuk I, Kochańczyk M, Lipniacki T. Non-self RNA rewires IFNβ signaling: A mathematical model of the innate immune response (submitted) bioRxiv

Grabowski F, Kochańczyk M, Korwek Z, Czerkies M, Prus W, Lipniacki T. Antagonism between viral infection and innate immunity at the single-cell level (submitted) bioRxiv Data

Nałęcz-Jawecki P, Gagliardi PA, Kochańczyk M, Dessauges C, Pertz O, Lipniacki T. The rate of information transmission through the MAPK/ERK signaling pathway stimulated in a pulsatile manner (submitted) bioRxiv Data

Jaruszewicz-Błońska J, Kosiuk I, Prus W, Lipniacki T. A plausible identifiable model of the canonical NF-κB signaling pathway (submitted) bioRxiv

Rinoldi C, Ziai Y, Zargarian SS, Nakielski P, Zembrzycki K, Haghighat Bayan MA, Zakrzewska A, Fiorelli R, Lanzi M, Kostrzewska-Księżyk A, Czajkowski R, Kublik E, Kaczmarek L, Pierini F. In vivo chronic brain cortex signal recording based on a soft conductive hydrogel biointerface, ACS Appl Mater Interfaces (accepted) CrossRef

Paradiso A, Volpi M, Rinoldi C, Celikkin N, Contessi Negrini N, Bilgen M, Dallera G, Pierini F, Costantini M, Święszkowski W, Farè S. In vitro functional models for human liver diseases and drug screening: beyond animal testing, Biomater Sci (accepted) CrossRef

Wang M, Du J, Li M, Pierini F, Li X, Yu J, Ding B. In-situ forming double-crosslinked hydrogels with highly dispersed short fibers for treatment of irregular wounds, Biomater Sci (accepted) CrossRef

Quadretti D, Marinelli M, Salatelli E, Pierini F, Zanelli A, Lanzi M. Effects of water/alcohol soluble cationic polythiophenes as cathode interlayers for eco-friendly solar cells, Macromol Chem Phys (accepted) CrossRef

2022

Topolewski P, Zakrzewska KE, Walczak J, Nienałtowski K, Müller-Newen G, Singhand A, Komorowski M. Phenotypic variability, not noise, accounts for most of the cell-to-cell heterogeneity in IFN-γ and oncostatin M signaling responses, Sci Signal (2022) PubMed CrossRef

Zaremba D, Błoński S, Korczyk PM. Concentration on demand – a microfluidic system for precise adjustment of the content of single droplets, Chem Eng J 430(3):132935 (2022) CrossRef | PDF

Czerkies M, Kochańczyk M, Korwek Z, Prus W, Lipniacki T. Respiratory syncytial virus protects bystander cells against influenza A virus infection by triggering secretion of type I and type III interferons, J Virol 96:22 e01341-22 (2022) PubMed CrossRef bioRxiv

Grabowski F, Kochańczyk M, Lipniacki T. The spread of SARS-CoV-2 variant Omicron with the doubling time of 2.0–3.3 days can be explained by immune evasion, Viruses 14(2):294 (2022) PubMed CrossRef medRxiv | PDF Correspondence

Mines RC, Lipniacki T, Shen X. Slow nucleosome dynamics set the transcriptional speed limit and induce RNA polymerase II traffic jams and bursts, PLOS Comput Biol 18(2):e1009811 (2022) PubMed CrossRef

Rabcuka J, Blonski S, Meli A, Sowemimo-Coker S, Zaremba D, Stephenson D, Dzieciatkowska M, Nerguizian D, Cardigan R, Korczyk PM, Smethurst PA, D'Alessandro A, Swietach P. Metabolic reprogramming under hypoxic storage preserves faster oxygen unloading from stored red blood cells, Blood Adv 6(18):5415–5428 (2022) PubMed CrossRef

Banerjee M, Lipniacki T, d’Onofrio A, Volpert A. Epidemic model with strain-dependent transmission rate, Commun Nonlinear Sci Numer Simul 114:106641 (2022) CrossRef

Zakrzewska A, Haghighat Bayan MA, Nakielski P, Petronella F, De Sio L, Pierini F. Nanotechnology transition roadmap toward multifunctional stimuli-responsive face masks, ACS Appl Mater Interfaces 14(41):46123–46144 (2022) PubMed CrossRef

Marinelli M, Lanzi M, Pierini F, Ziai Y, Zanelli A, Quadretti D, Di Maria F, Salatelli E. Ionic push–pull polythiophenes: A further step towards eco-friendly BHJ organic solar cells, Polymers 14(19):3965 (2022) PubMed CrossRef

Ziai Y, Petronella F, Rinoldi C, Nakielski P, Zakrzewska A Kowalewski TA, Augustyniak W, Li X, Calogero A, Sabała I, Ding B, De Sio L, Pierini F. Chameleon-inspired multifunctional plasmonic nanoplatforms for biosensing applications, NPG Asia Mater 14:18 (2022) CrossRef

de Amorim Filho EC, Moreira RA, Santos FAN The Euler characteristic and topological phase transitions in complex systems, J Phys: Complexity 3:025003 (2022) CrossRef

Nakielski P, Rinoldi C, Pruchniewski M, Pawłowska S, Gazińska M, Strojny B, Rybak D, Jezierska-Woźniak K, Urbanek O, Denis P, Sinderewicz E, Czelejewska W, Staszkiewicz-Chodor J, Grodzik M, Ziai Y, Barczewska M, Maksymowicz W, Pierini F. Laser-assisted fabrication of injectable nanofibrous cell carriers, Small 18(2):e2104971 (2022) PubMed CrossRef

Liu Z, Moreira RA, Dujmović A, Liu H, Yang B, Poma AB, Nash MA. Mapping mechanostable pulling geometries of a therapeutic anticalin/CTLA-4 protein complex, Nano Lett 22(1):179–187 (2022) PubMed CrossRef

Liu Y, Wang Q, Liu X, Nakielski P, Pierini F, Li X, Yu J, Ding B. Highly adhesive, stretchable and breathable gelatin methacryloyl-based nanofibrous hydrogels for wound dressings, ACS Appl Bio Mater 5(3):1047–1056 (2022) PubMed CrossRef

Liguori A, Pandini S, Rinoldi C, Zaccheroni N, Pierini F, Focarete ML, Gualandi C. Thermo-active smart electrospun nanofibers, Macromol Rapid Commun 2100694 (2022) CrossRef | PDF

Glaeser JD, Bao X, Kaneda G, Avalos P, Behrens P, Salehi K, Da X, Chen A, Castaneda C, Nakielski P, Jiang W, Tawackoli W, Sheyn D. iPSC-neural crest derived cells embedded in 3D printable bio-ink promote cranial bone defect repair, Sci Rep 12:18701 (2022) PubMed CrossRef

Ziai Y, Rinoldi C, Nakielski P, De Sio L, Pierini F. Smart plasmonic hydrogels based on gold and silver nanoparticles for biosensing application, Curr Opin Biomed Eng 24:100413 (2022) CrossRef

Mahiout LA, Kaźmierczak B, Volpert V. Viral infection spreading and mutation in cell culture, Mathematics 10(2):256 (2022) CrossRef | PDF

La Monaca A, Girard G, Savoie S, Krachkovskiy S, Veillette R, Pierini F, Ashok V, Rosei F, Paolella A. Influence of Ti^IV substitution on the properties of a Li_1.5Al_0.5Ge_1.5(PO₄)₃ nanofiber-based solid electrolyte, Nanoscale 14:5094–5101 (2022) PubMed CrossRef

Cantor D, Wojtacki K. Effects of friction and spacing on the collaborative behavior of domino toppling, Phys Rev Appl 17:064021 (2022) CrossRef

Komorowski M. Making sense of BMP signaling complexity, Cell Syst 13(5):349–351 (2022) PubMed CrossRef

@@ Line 64: / Line 64: @@
 * <span class="pmbm">Komorowski&nbsp;M</span>. '''Making sense of BMP signaling complexity''', ''Cell Syst'' <u>13</u>(5):349–351 (2022) [https://pubmed.ncbi.nlm.nih.gov/35588697 PubMed] [https://doi.org/10.1016/j.cels.2022.04.002 CrossRef]
-===2021===
-* <span class="pmbm">Błoński&nbsp;S</span>, <span class="nopmbm">J&nbsp;Aureille</span>, <span class="nopmbm">S&nbsp;Badawi</span>, <span class="pmbm">D&nbsp;Zaremba</span>, <span class="nopmbm">L&nbsp;Pernet</span>, <span class="nopmbm">A&nbsp;Grichine</span>, <span class="nopmbm">S&nbsp;Fraboulet</span>, <span class="pmbm">PM&nbsp;Korczyk</span>, <span class="nopmbm">P&nbsp;Recho</span>, <span class="nopmbm">Ch&nbsp;Guilluy</span>, <span class="nopmbm">ME&nbsp;Dolega</span>. '''Direction of epithelial folding defines impact of mechanical forces on epithelial state''', ''Dev&nbsp;Cell'' <u>56</u>:3222–3234 (2021) [https://pubmed.ncbi.nlm.nih.gov/34875225] [https://doi.org/10.1016/j.devcel.2021.11.008 CrossRef]
-* <span class="nopmbm">M&nbsp;Koehler</span>, <span class="nopmbm">A&nbsp;Ray</span>, <span class="pmbm">RA&nbsp;Moreira</span>, <span class="nopmbm">B&nbsp;Juniku</span>, <span class="pmbm">AB&nbsp;Poma</span>, <span class="nopmbm">D&nbsp;Alsteens</span>. '''Molecular insights into receptor binding energetics and neutralization of SARS-CoV-2 variants''', ''Nat&nbsp;Commun'' <u>12</u>(1):6977 (2021) [https://pubmed.ncbi.nlm.nih.gov/34848718 PubMed] [http://dx.doi.org/10.1038/s41467-021-27325-1 CrossRef]
-* <span class="author">Kochańczyk&nbsp;M</span> &amp; <span class="author">Lipniacki&nbsp;T</span>. '''Pareto-based evaluation of national responses to COVID-19 pandemic shows that saving lives and protecting economy are non-trade-off objectives''', ''Sci&nbsp;Rep'' <u>11</u>:2425 (2021) &nbsp;[https://pubmed.ncbi.nlm.nih.gov/33510274 PubMed] [https://doi.org/10.1038/s41598-021-81869-2 CrossRef] [https://www.medrxiv.org/content/10.1101/2020.06.27.20141747v2 medRxiv] | [https://www.nature.com/articles/s41598-021-81869-2.pdf PDF] [https://github.com/kochanczyk/covid19-pareto GitHub]
-* <span class="pmbm">Grabowski&nbsp;F</span>, <span class="nopmbm">Preibisch&nbsp;G</span>, <span class="nopmbm">Giziński&nbsp;S</span>, <span class="pmbm">Kochańczyk&nbsp;M</span>, <span class="pmbm">Lipniacki&nbsp;T</span>.  '''SARS-CoV-2 Variant of Concern 202012/01 has about twofold replicative advantage and&nbsp;acquires concerning mutations''', ''Viruses'' <u>13</u>(3):392 (2021) [https://pubmed.ncbi.nlm.nih.gov/33804556 PubMed] [https://doi.org/10.3390/v13030392 CrossRef] [https://doi.org/10.1101/2020.12.28.20248906 medRxiv] | [https://www.mdpi.com/1999-4915/13/3/392/pdf PDF]
-* <span class="pmbm">Zaremba&nbsp;D</span>, <span class="pmbm">Błoński&nbsp;S</span>, <span class="pmbm">Korczyk&nbsp;PM</span>. '''Integration of capillary–hydrodynamic logic circuitries for built-in control over multiple droplets in microfluidic networks''', ''Lab Chip'' <u>21</u>:1771 (2021) [https://pubmed.ncbi.nlm.nih.gov/33710202 PubMed] [http://doi.org/10.1039/d0lc00900h CrossRef]
-* <span class="pmbm">Kaźmierczak&nbsp;B</span> &amp; <span class="nopmbm">Sneyd&nbsp;J</span>. '''Speed of traveling waves for monotone reaction–diffusion systems as a function of diffusion coefficients''', ''Physica D: Nonlin Phenom'' <u>424</u>:132940 (2021) [https://doi.org/10.1016/j.physd.2021.132940 CrossRef]
-* <span class="pmbm">Nienałtowski&nbsp;K</span>, <span class="nopmbm">Rigby&nbsp;RE</span>, <span class="pmbm">Walczak&nbsp;J</span>, <span class="pmbm">Zakrzewska&nbsp;KE</span>, <span class="pmbm">Głów&nbsp;E</span>, <span class="nopmbm">Rehwinkel&nbsp;J</span>, <span class="pmbm">Komorowski&nbsp;M</span>. '''Fractional response analysis reveals logarithmic cytokine responses in cellular populations''', ''Nat Commun'' <u>12</u>:4175 (2021) [https://pubmed.ncbi.nlm.nih.gov/34234126 PubMed] [https://doi.org/10.1038/s41467-021-24449-2 CrossRef]
-* <span class="pmbm">Topolewski&nbsp;P</span> &amp; <span class="pmbm">Komorowski&nbsp;M</span>. '''Information-theoretic analyses of cellular strategies for achieving high signaling capacity — dynamics, cross-wiring and heterogeneity of cellular states''', ''Curr Opin Syst Biol'' <u>27</u>:100352 (2021) [https://doi.org/10.1016/j.coisb.2021.06.003 CrossRef]
-* <span class="nopmbm">Fiebelkow&nbsp;J</span>, <span class="nopmbm">Guendel&nbsp;A</span>, <span class="nopmbm">Guendel&nbsp;B</span>, <span class="nopmbm">Mehwald&nbsp;N</span>, <span class="pmbm">Jetka&nbsp;T</span>, <span class="pmbm">Komorowski&nbsp;M</span>, <span class="nopmbm">Waldherr&nbsp;S</span>, <span class="nopmbm">Schaper&nbsp;F</span>, <span class="nopmbm">Dittrich&nbsp;A</span>. '''The tyrosine phosphatase SHP2 increases robustness and information transfer within IL-6-induced JAK/STAT signalling''', ''Cell Commun Signal'' <u>19</u>:94 (2021) [https://pubmed.ncbi.nlm.nih.gov/34530865 PubMed] [https://doi.org/10.1186/s12964-021-00770-7 CrossRef]
-* <span class="pmbm">Poma&nbsp;A</span>, <span class="nopmbm">Thu&nbsp;TTM</span>, <span class="nopmbm">Tu&nbsp;LA</span>, <span class="nopmbm">Hu C-K</span>, <span class="nopmbm">Li MS</span>. '''Nanomechanical stability of Aβ tetramers and fibril-like structures: Molecular dynamics simulations''', ''J&nbsp;Phys Chem&nbsp;B'' <u>125</u>(28):7628−7637 (2021) [https://pubmed.ncbi.nlm.nih.gov/34253022 PubMed] [http://dx.doi.org/10.1021/acs.jpcb.1c02322 CrossRef]
-* <span class="pmbm">Piechocka&nbsp;IK</span>, <span class="nopmbm">Keary&nbsp;S</span>, <span class="nopmbm">Sosa-Costa&nbsp;A</span>, <span class="nopmbm">Lau&nbsp;L</span>, <span class="nopmbm">Mohan&nbsp;N</span>, <span class="nopmbm">Stanisavljevic&nbsp;J</span>, <span class="nopmbm">Borgman&nbsp;KJE</span>, <span class="nopmbm">Lakadamyali&nbsp;M</span>, <span class="nopmbm">Manzo&nbsp;C</span>, <span class="nopmbm">Garcia-Parajo&nbsp;MF</span>. '''Shear forces induce ICAM-1 nanoclustering onendothelial cells that impact on T-cell migration''', ''Biophys&nbsp;J'' <u>120</u>:2644–2656 (2021) [https://pubmed.ncbi.nlm.nih.gov/34087211 PubMed] [https://doi.org/10.1016/j.bpj.2021.05.016 CrossRef]
-* <span class="pmbm">Rinoldi&nbsp;C</span>, <span class="nopmbm">Lanzi&nbsp;M</span>, <span class="nopmbm">Fiorelli&nbsp;R</span>, <span class="pmbm">Nakielski&nbsp;P</span>, <span class="pmbm">Zembrzycki&nbsp;K</span>, <span class="pmbm">Kowalewski&nbsp;T</span>, <span class="nopmbm">Urbanek&nbsp;O</span>, <span class="nopmbm">Grippo&nbsp;V</span>, <span class="nopmbm">Jezierska-Woźniak &nbsp;K</span>, <span class="nopmbm">Maksymowicz&nbsp;W</span>, <span class="nopmbm">Camposeo&nbsp;A</span>, <span class="nopmbm">Bilewicz&nbsp;R</span>, <span class="nopmbm">Pisignano&nbsp;D</span>, <span class="nopmbm">Sanai&nbsp;N</span>,  <span class="pmbm">Pierini&nbsp;F</span>. '''Three-dimensional printable conductive semi-interpenetrating polymer network hydrogel for neural tissue applications''', ''Biomacromolecules'' <u>22</u>(7):3084–3098 (2021) [https://pubmed.ncbi.nlm.nih.gov/34151565 PubMed] [https://doi.org/10.1021/acs.biomac.1c00524 CrossRef] | [https://pubs.acs.org/doi/pdf/10.1021/acs.biomac.1c00524 PDF]
-* <span class="pmbm">Rinoldi&nbsp;C</span>, <span class="pmbm">Zargarian&nbsp;SS</span>, <span class="pmbm">Nakielski&nbsp;P</span>, <span class="nopmbm">Li&nbsp;X</span>, <span class="nopmbm">Liguori&nbsp;A</span>,  <span class="nopmbm">Petronella&nbsp;G</span>, <span class="nopmbm">Presutti&nbsp;D</span>,  <span class="nopmbm">Wang&nbsp;Q</span>,  <span class="nopmbm">Costantini&nbsp;M</span>,  <span class="nopmbm">De&nbsp;Sio&nbsp;L</span>,  <span class="nopmbm">Gualandi&nbsp;C</span>, <span class="nopmbm">Ding&nbsp;B</span>, <span class="pmbm">Pierini&nbsp;F</span>. '''Nanotechnology-assisted RNA delivery: From nucleic acid therapeutics to COVID-19 vaccines''', ''Small Meth'' <u>5</u>(9):2100402 (2021) [https://pubmed.ncbi.nlm.nih.gov/34928055 PubMed] [https://doi.org/10.1002/smtd.202100402 CrossRef]
-* <span class="pmbm">Haghighat&nbsp;Bayan&nbsp;MA</span>, <span class="nopmbm">Taromi&nbsp;FA</span>, <span class="nopmbm">Lanzi &nbsp;M</span>, <span class="pmbm">Pierini&nbsp;F</span>. '''Enhanced efficiency in hollow core electrospun nanofiber-based organic solar cells''', ''Sci&nbsp;Rep'' <u>11</u>:21144 (2021) [https://pubmed.ncbi.nlm.nih.gov/34707121 PubMed] [https://doi.org/10.1038/s41598-021-00580-4 CrossRef]
-* <span class="nopmbm">Lanzi&nbsp;M</span> &amp; <span class="pmbm">Pierini&nbsp;F</span>. '''Efficient and thermally stable BHJ solar cells based on a soluble hydroxy-functionalized regioregular polydodecylthiophene''', ''React Funct Polym'' <u>158</u>:104803 (2021) [https://doi.org/10.1016/j.reactfunctpolym.2020.104803 CrossRef]
-* <span class="nopmbm">De&nbsp;Sio&nbsp;L</span>, <span class="nopmbm">Ding&nbsp;B</span>, <span class="nopmbm">Focsan&nbsp;M</span>, <span class="nopmbm">Kogermann&nbsp;K</span>, <span class="nopmbm">Pascoal-Faria&nbsp;P</span>, <span class="nopmbm">Petronella&nbsp;F</span>, <span class="nopmbm">Mitchell&nbsp;G</span>, <span class="nopmbm">Zussmann&nbsp;E</span>, <span class="pmbm">Pierini&nbsp;F</span>. '''Personalized reusable face masks with smart nano‐assisted destruction of pathogens for COVID‐19: A visionary road''', ''Chem&nbsp;Eur&nbsp;J'' <u>27</u>(20):6112–6130 (2021) [https://pubmed.ncbi.nlm.nih.gov/33284500 PubMed] [https://doi.org/10.1002/chem.202004875 CrossRef]
-* <span class="nopmbm">Lanzi&nbsp;M</span>, <span class="nopmbm">Quadretti&nbsp;D</span>, <span class="pmbm">Marinelli&nbsp;M</span>, <span class="pmbm">Ziai&nbsp;Y</span>, <span class="nopmbm">Salatelli&nbsp;E</span>, <span class="pmbm">Pierini&nbsp;F</span>. '''Influence of the active layer structure on the photovoltaic performance of water-soluble polythiophene-based solar cells''', ''Polymers'' <u>13</u>(10):1640 (2021) [https://pubmed.ncbi.nlm.nih.gov/34070205 PubMed] [https://doi.org/10.3390/polym13101640 CrossRef]
-* <span class="nopmbm">Guglielmelli&nbsp;A</span>, <span class="pmbm">Pierini&nbsp;F</span>, <span class="nopmbm">Tabiryan&nbsp;N</span>, <span class="nopmbm">Umeton&nbsp;C</span>, <span class="nopmbm">Bunning&nbsp;TJ</span>, <span class="nopmbm">De&nbsp;Sio&nbsp;L</span>. '''Thermoplasmonics with gold nanoparticles: A&nbsp;new weapon in modern optics and biomedicine''', ''Adv Photonics Res'' 2000198 (2021) [https://doi.org/10.1002/adpr.202000198 CrossRef]
-* <span class="nopmbm">Marinelli&nbsp;M</span>, <span class="nopmbm">Candini&nbsp;A</span>, <span class="nopmbm">Monti&nbsp;F</span>, <span class="nopmbm">Boschi&nbsp;A</span>, <span class="nopmbm">Zangoli&nbsp;M</span>, <span class="nopmbm">Salatelli&nbsp;E</span>, <span class="pmbm">Pierini&nbsp;F</span>, <span class="nopmbm">Lanzi&nbsp;M</span>, <span class="nopmbm">Zanelli&nbsp;A</span>, <span class="nopmbm">Gazzano&nbsp;M</span>, <span class="nopmbm">Di&nbsp;Maria&nbsp;F</span>. '''Push–pull thiophene-based small molecules with donor and acceptor units of varying strength for photovoltaic application: Beyond P3HT and PCBM''', ''J&nbsp;Mater Chem&nbsp;C'' <u>9</u>:11216–11228 (2021) [https://doi.org/10.1039/D1TC02641K CrossRef]
-* <span class="nopmbm">Cidonio&nbsp;G</span>, <span class="nopmbm">Costantini&nbsp;M</span>, <span class="pmbm">Pierini&nbsp;F</span>, <span class="nopmbm">Scognamiglio&nbsp;C</span>, <span class="nopmbm">Agarwal&nbsp;T</span>, <span class="nopmbm">Barbetta&nbsp;A</span>. '''3D&nbsp;printing of biphasic inks: Beyond single-scale architectural control''', ''J&nbsp;Mater Chem&nbsp;C'' (2021) <u>9</u>:12489–12508  [http://dx.doi.org/10.1039/d1tc02117f CrossRef]
-* <span class="nopmbm">Urbanek O</span>, <span class="nopmbm">Wysocka A</span>, <span class="pmbm">Nakielski P</span>, <span class="pmbm">Pierini F</span>, <span class="nopmbm">Jagielska E</span>, <span class="nopmbm">Sabała I</span>. '''<i>Staphylococcus aureus</i> specific electrospun wound dressings: Influence of immobilization technique on antibacterial efficiency of novel enzybiotic''', ''Pharmaceutics'' <u>13</u>(5), 711 (2021) [https://pubmed.ncbi.nlm.nih.gov/34068117 PubMed] [https://doi.org/10.3390/pharmaceutics13050711 CrossRef]
-* <span class="nopmbm">La&nbsp;Monac&nbsp;A</span>, <span class="nopmbm">Girard&nbsp;G</span>, <span class="nopmbm">Savoie&nbsp;S</span>, <span class="nopmbm">Bertoni&nbsp;G</span>, <span class="nopmbm">Krachkovskiy&nbsp;S</span>, <span class="nopmbm">Vijh&nbsp;A</span>, <span class="pmbm">Pierini&nbsp;F</span>,<span class="nopmbm"> Rosei&nbsp;F</span>, <span class="nopmbm">Paolella&nbsp;A</span>. '''Synthesis of electrospun NASICON Li<sub>1.5</sub>Al<sub>0.5</sub>Ge<sub>1.5</sub>(PO<sub>4</sub>)<sub>3</sub> solid electrolyte nanofibers by control of germanium hydrolysis''', ''J&nbsp;Electrochem&nbsp;Soc'' <u>168</u>(11):110512 (2021) [https://doi.org/10.1149/1945-7111/ac334a CrossRef]
-* <span class="nopmbm">Mahmood&nbsp;MI</span>, <span class="pmbm">Poma&nbsp;AB</span>, <span class="nopmbm">Okazaki K</span>. '''Optimizing Gō-MARTINI coarse-grained model for F-BAR protein on lipid membrane''', ''Front Mol Biosci'', <u>8</u>:619381 [https://pubmed.ncbi.nlm.nih.gov/33693028 PubMed] [https://doi.org/10.3389/fmolb.2021.619381 CrossRef]
-* <span class="nopmbm">Wencel&nbsp;A</span>, <span class="nopmbm">Ciezkowska&nbsp;M</span>, <span class="nopmbm">Wisniewska&nbsp;M</span>, <span class="pmbm">Zakrzewska&nbsp;KE</span>, <span class="nopmbm">Pijanowska&nbsp;DG</span>, <span class="nopmbm">Pluta&nbsp;KD</span>. '''Effects of genetically modified human skin fibroblasts, stably overexpressing hepatocyte growth factor, on hepatic functions of cocultured C3A cells''', ''Biotechnol Bioeng'' <u>118</u>(1):72–81 (2021) [https://pubmed.ncbi.nlm.nih.gov/32880912 PubMed] [https://doi.org/10.1002/bit.27551 CrossRef]
-* <span class="nopmbm">Janczewska&nbsp;M</span>, <span class="nopmbm">Szkop&nbsp;M</span>, <span class="nopmbm">Pikus&nbsp;G</span>, <span class="nopmbm">Kopyra&nbsp;K</span>, <span class="nopmbm">Świątkowska&nbsp;A</span>, <span class="nopmbm">Brygoła&nbsp;K</span>, <span class="nopmbm">Karczmarczyk&nbsp;U</span>, <span class="pmbm">Walczak&nbsp;J</span>, <span class="nopmbm">Żuk&nbsp;MT</span>, <span class="nopmbm">Duszak&nbsp;J</span>, <span class="nopmbm">Ciach&nbsp;T</span>. '''PSMA targeted conjugates based on dextran''', ''Appl&nbsp;Radiat&nbsp;Isot'' <u>167</u>:109439 (2021) [https://doi.org/10.1016/j.apradiso.2020.109439 CrossRef]
-* <span class="nopmbm">Boopathi&nbsp;S</span>, <span class="pmbm">Poma&nbsp;AB</span>, <span class="nopmbm">Garduño-Juárez&nbsp;R</span>. '''An overview of several inhibitors for Alzheimer’s disease: Characterization and failure''',  ''Int&nbsp;J&nbsp;Mol&nbsp;Sci'' <u>22</u>:10798 (2021) [https://pubmed.ncbi.nlm.nih.gov/34639140 PubMed] [https://doi.org/10.3390/ijms221910798 CrossRef]
-* <span class="nopmbm">Dębska-Vielhaber&nbsp;G</span>, <span class="nopmbm">Miller&nbsp;I</span>, <span class="nopmbm">Peeva&nbsp;V</span>, <span class="nopmbm">Zuschratter&nbsp;W</span>, <span class="pmbm">Walczak&nbsp;J</span>, <span class="nopmbm">Schreiber&nbsp;S</span>, <span class="nopmbm">Petri&nbsp;S</span>, <span class="nopmbm">Machts&nbsp;J</span>, <span class="nopmbm">Vogt&nbsp;S</span>, <span class="nopmbm">Szczepanowska&nbsp;J</span>, <span class="nopmbm">Gellerich&nbsp;FN</span>, <span class="nopmbm">Hermann&nbsp;A</span>, <span class="nopmbm">Vielhaber&nbsp;S</span>, <span class="nopmbm">Kunz&nbsp;WS</span> '''Impairment of mitochondrial oxidative phosphorylation in skin fibroblasts of SALS and FALS patients is rescued by in vitro treatment with ROS scavengers''', ''Exp Neurol'' <u>339</u>:113620 (2021) [https://pubmed.ncbi.nlm.nih.gov/33497646 PubMed] [http://dx.doi.org/10.1016/j.expneurol.2021.113620 CrossRef]
-* <span class="nopmbm">Majkut&nbsp;M</span>, <span class="nopmbm">Kwiecińska-Piróg&nbsp;J</span>, <span class="nopmbm">Wszelaczyńska&nbsp;E</span>, <span class="nopmbm">Pobereżny&nbsp;J</span>, <span class="nopmbm">Gospodarek-Komkowska&nbsp;E</span>, <span class="pmbm">Wojtacki&nbsp;K</span>, <span class="nopmbm">Barczak&nbsp;T</span>. '''Antimicrobial activity of heat-treated Polish honeys''', ''Food Chem'' <u>343</u>:128561 (2020) [https://pubmed.ncbi.nlm.nih.gov/33267984 PubMed] [https://dx.doi.org/10.1016/j.foodchem.2020.128561 CrossRef]
-===2020===
-* <span class="pmbm">Kochańczyk&nbsp;M</span>, <span class="nopmbm">Grabowski&nbsp;F</span>, <span class="pmbm">Lipniacki&nbsp;T</span>. '''Super-spreading events initiated the exponential growth phase of COVID-19 with <i>R</i><sub>0</sub> higher than initially estimated''', ''R&nbsp;Soc&nbsp;Open&nbsp;Sci'' <u>7</u>:200786 (2020) [https://pubmed.ncbi.nlm.nih.gov/33047040 PubMed] [https://doi.org/10.1098/rsos.200786 CrossRef] | [https://royalsocietypublishing.org/doi/pdf/10.1098/rsos.200786 PDF] [https://royalsocietypublishing.org/doi/suppl/10.1098/rsos.200786 SuppInfo-PDF] [https://royalsocietypublishing.org/action/downloadSupplement?doi=10.1098/rsos.200786&file=rsos200786_review_history.pdf Correspondence]
-* <span class="pmbm">Hat&nbsp;B</span>, <span class="pmbm">Jaruszewicz-Błońska&nbsp;J</span>, <span class="pmbm">Lipniacki T</span>. '''Model-based optimization of combination protocols for irradiation-insensitive cancers''', ''Sci&nbsp;Rep'' <u>10</u>:12652 (2020) [https://pubmed.ncbi.nlm.nih.gov/32724100 PubMed] [https://doi.org/10.1038/s41598-020-69380-6 CrossRef] | [https://www.nature.com/articles/s41598-020-69380-6.pdf PDF]
-* <span class="pmbm">Bialecki S</span>, <span class="pmbm">Nalecz-Jawecki P</span>, <span class="pmbm">Kazmierczak B</span>, <span class="pmbm">Lipniacki</span>. '''Traveling and standing fronts on&nbsp;curved surfaces''', ''Physica D'' <u>401</u>:132215 (2020) [https://doi.org/10.1016/j.physd.2019.132215 CrossRef]
-* <span class="pmbm">Kochańczyk M</span>, <span class="nopmbm">Grabowski F</span>, <span class="pmbm">Lipniacki T</span>. '''Dynamics of COVID-19 pandemic at constant and time-dependent contact rates''', ''Math Model Nat Phenom'' <u>15</u>:28 (2020) [https://doi.org/10.1051/mmnp/2020011 CrossRef] | [https://www.mmnp-journal.org/articles/mmnp/pdf/forth/mmnp200048.pdf PDF] [http://pmbm.ippt.pan.pl/model/covid19/covid19_model.nb SuppCode]
-* <span class="pmbm">Chatterjee&nbsp;P</span>, <span class="nopmbm">Glimm&nbsp;T</span>, <span class="pmbm">Kaźmierczak&nbsp;B</span>. '''Mathematical modeling of chondrogenic pattern formation during limb development: Recent advances in continuous models''', ''Math&nbsp;Biosci'' <u>322</u>:108319 (2020) [https://pubmed.ncbi.nlm.nih.gov/32001201 PubMed] [https://doi.org/10.1016/j.mbs.2020.108319 CrossRef]
-* <span class="pmbm">Nakielski&nbsp;P</span>,  <span class="pmbm">Pawłowska&nbsp;S</span>, <span class="pmbm">Rinoldi&nbsp;C</span>, <span class="pmbm">Ziai&nbsp;Y</span>, <span class="nopmbm">De&nbsp;Sio&nbsp;L</span>, <span class="nopmbm">Urbanek&nbsp;O</span>, <span class="pmbm">Zembrzycki&nbsp;K</span>, <span class="pmbm">Pruchniewski&nbsp;M</span>, <span class="nopmbm">Lanzi&nbsp;M</span>, <span class="nopmbm">Salatelli&nbsp;E</span>, <span class="nopmbm">Calogero&nbsp;A</span>, <span class="pmbm">Kowalewski&nbsp;TA</span>, <span class="nopmbm">Yarin&nbsp;AL</span>, <span class="pmbm">Pierini&nbsp;F</span>. '''Multifunctional platform based on electrospun nanofibers and plasmonic hydrogel: A smart nanostructured pillow for near-infrared light-driven biomedical applications''', ''ACS Appl Mater Interfaces'' <u>12</u>(49):54328–54342 (2020) [https://pubmed.ncbi.nlm.nih.gov/33238095 PubMed] [https://dx.doi.org/10.1021/acsami.0c13266 CrossRef]
-* <span class="pmbm">Pierini&nbsp;F</span>, <span class="nopmbm">Guglielmelli&nbsp;A</span>, <span class="nopmbm">Urbanek&nbsp;O</span>, <span class="pmbm">Nakielski&nbsp;P</span>, <span class="nopmbm">Pezzi&nbsp;L</span>, <span class="nopmbm">Buda&nbsp;R</span>, <span class="nopmbm">Lanzi&nbsp;M</span>, <span class="pmbm">Kowalewski&nbsp;TA</span>, <span class="nopmbm">De&nbsp;Sio&nbsp;L</span>. '''Thermoplasmonic-activated hydrogel based dynamic light attenuator''', ''Adv&nbsp;Opt&nbsp;Mater'' 2000324 (2020) [https://doi.org/10.1002/adom.202000324 CrossRef] | [http://pmbm.ippt.pan.pl/publications/supplementary/Pierini-2020-AdvOptMater-SuppInfo.pdf SuppInfo-PDF] [http://pmbm.ippt.pan.pl/publications/supplementary/Pierini-2020-AdvOptMater-SuppMovie.avi SuppMovie-AVI]
-* <span class="pmbm">Pawłowska&nbsp;S</span>, <span class="pmbm">Rinoldi&nbsp;C</span>, <span class="pmbm">Nakielski&nbsp;P</span>, <span class="pmbm">Ziai&nbsp;Y</span>, <span class="nopmbm">Urbanek&nbsp;O</span>, <span class="nopmbm">Li&nbsp;X</span>, <span class="pmbm">Kowalewski&nbsp;TA</span>, <span class="nopmbm">Ding&nbsp;B</span>, <span class="pmbm">Pierini&nbsp;F</span>. '''Ultraviolet light-assisted electrospinning of core–shell fully cross-linked P(NIPAAm-<i>co</i>-NIPMAAm) hydrogel-based nanofibers for thermally-induced drug delivery self-regulation''', ''Adv Mater Interfaces'' 2000247 (2020) [https://doi.org/10.1002/admi.202000247 CrossRef] | [http://pmbm.ippt.pan.pl/publications/supplementary/Pawlowska-2020-AdvMaterInterfaces-SuppInfo.pdf SuppInfo-PDF] [http://pmbm.ippt.pan.pl/publications/supplementary/Pawlowska-2020-AdvMaterInterfaces-SuppMovie.mp4 SuppMovie-MP4]  [https://onlinelibrary.wiley.com/doi/10.1002/admi.202070064 CoverPicture]
-* <span class="pmbm">Blonski S</span>, <span class="pmbm">Zaremba D</span>, <span class="pmbm">Jachimek M</span>, <span class="nopmbm">Jakiela S</span>, <span class="nopmbm">Wacławczyk T</span>, <span class="pmbm">Korczyk PM</span>. '''Impact of inertia and channel angles on flow distribution in microfluidic junctions''', ''Microfluid Nanofluid'' <u>24</u>:14 (2020) [https://doi.org/10.1007/s10404-020-2319-6 CrossRef]
-* <span class="nopmbm">Sankaran A</span>, <span class="pmbm">Pawłowska S</span>, <span class="pmbm">Pierini F</span>, <span class="pmbm">Kowalewski</span>, <span class="nopmbm"> Yarin AL</span>. '''Dynamics of electrospun hydrogel filaments in oscillatory microchannel flows: A theoretical and experimental approach''',  ''Phys&nbsp;Fluids'' <u>32</u>(7):072008 (2020) [https://doi.org/10.1063/5.0011005 CrossRef] | [http://pmbm.ippt.pan.pl/publications/Sankaran_2020_PhysFluids.pdf PDF]
-*  <span class="nopmbm">Chen&nbsp;WC</span>, <span class="pmbm">Kaźmierczak&nbsp;B</span>. '''Traveling waves in quadratic autocatalytic systems with complexing agent''', ''Discrete Contin Dyn Syst–Ser&nbsp;B'' (2020) [http://dx.doi.org/10.3934/dcdsb.2020364 CrossRef]
-* <span class="pmbm">Moreira RA</span>, <span class="nopmbm">Chwastyk M</span>, <span class="nopmbm">Baker&nbsp;JL</span>, <span class="nopmbm">Guzman&nbsp;HV</span>, <span class="pmbm">Poma&nbsp;AB</span>. '''Quantitative determination of mechanical stability in the novel coro-navirus spike protein''', ''Nanoscale'' <u>12</u>:16409 (2020) [https://pubmed.ncbi.nlm.nih.gov/32725017 PubMed] [https://doi.org/10.1039/D0NR03969A CrossRef]
-* <span class="pmbm">Moreira&nbsp;RA</span>, <span class="nopmbm">Guzman&nbsp;HV</span>, <span class="nopmbm">Boopathi&nbsp;S</span>, <span class="nopmbm">Baker&nbsp;JL</span>, <span class="pmbm">Poma&nbsp;AB</span>. '''Characterization of structural and energetic differences between conformations of the SARS-CoV-2 spike protein''', ''Materials'' <u>13</u>(23):5362 [https://pubmed.ncbi.nlm.nih.gov/33255977 PubMed] [https://doi.org/10.3390/ma13235362 CrossRef]
-* <span class="nopmbm">Zalewska-Piątek B</span>, <span class="nopmbm">Olszewski M</span>, <span class="pmbm">Lipniacki T</span>, <span class="pmbm">Błoński S</span>, <span class="nopmbm">Wieczór&nbsp;M</span>, <span class="nopmbm">Bruździak&nbsp;P</span>, <span class="nopmbm">Skwarska&nbsp;A</span>, <span class="nopmbm">Nowicki B</span>, <span class="nopmbm">Nowicki S</span>, <span class="nopmbm">Piątek R</span>. '''A shear stress micromodel of urinary tract infection by the ''Escherichia coli'' producing Dr adhesin''', ''PLOS Pathog'' <u>16</u>(1): e1008247 (2020) [https://www.ncbi.nlm.nih.gov/pubmed/31917805 PubMed] [https://doi.org/10.1371/journal.ppat.1008247 CrossRef]
-* <span class="nopmbm">Białobrzeska&nbsp;W</span>, <span class="nopmbm">Firganek&nbsp;D</span>, <span class="pmbm">Czerkies&nbsp;M</span>, <span class="pmbm">Lipniacki&nbsp;T</span>, <span class="nopmbm">Skwarecka&nbsp;M</span>, <span class="nopmbm">Dziąbowska&nbsp;K</span>, <span class="nopmbm">Cebula&nbsp;Z</span>, <span class="nopmbm">Malinowska&nbsp;N</span>, <span class="nopmbm">Bigus&nbsp;D</span>, <span class="nopmbm">Bięga&nbsp;E</span>, <span class="nopmbm">Pyrć&nbsp;K</span>, <span class="nopmbm">Pala&nbsp;K</span>, <span class="nopmbm">Żołędowska&nbsp;S</span>, <span class="nopmbm">Nidzworski&nbsp;D</span>. '''Electrochemical immunosensors based on screen-printed gold and glassy carbon electrodes: Comparison of performance for respiratory syncytial virus detection''', ''Biosensors'' <u>10</u>(11):175 (2020) [https://pubmed.ncbi.nlm.nih.gov/33202922 PubMed] [https://doi.org/10.3390/bios10110175 CrossRef]
-* <span class="nopmbm">Volpert&nbsp;V</span>, <span class="nopmbm">Banerjee&nbsp;M</span>, <span class="nopmbm">d’Onofrio&nbsp;A</span>, <span class="pmbm">Lipniacki&nbsp;T</span>, <span class="nopmbm">Petrovskii&nbsp;S</span>, <span class="nopmbm">Tran&nbsp;VC</span>. '''Coronavirus – Scientific insights and societal aspects''', ''Math Model Nat Phenom'' <u>15</u>:E2 (2020) [https://doi.org/10.1051/mmnp/2020010  CrossRef]
-* <span class="nopmbm">Bartali&nbsp;R</span>, <span class="nopmbm">Gaixia&nbsp;Z  </span>, <span class="nopmbm">Tong&nbsp;X</span>, <span class="nopmbm">Speranza&nbsp;G</span>, <span class="nopmbm">Micheli&nbsp;V</span>, <span class="nopmbm">Gottardi&nbsp;G</span>, <span class="nopmbm">Fedrizzi&nbsp;M</span>,  <span class="pmbm">Pierini&nbsp;F</span>, <span class="nopmbm">Sun&nbsp;S</span>, <span class="nopmbm">Laidani&nbsp;N</span>, <span class="nopmbm">Tavares&nbsp;AC</span>. '''Graphene oxide/reduced graphene oxide films as protective barriers on lead against differential aeration corrosion induced by water drops''', ''Nanoscale Adv'' <u>2</u>:5421 (2020) [https://pubmed.ncbi.nlm.nih.gov/36132024 PubMed] [http://dx.doi.org/10.1039/d0na00212g CrossRef] | [https://pubs.rsc.org/en/content/articlepdf/2020/na/d0na00212g PDF] [http://www.rsc.org/suppdata/d0/na/d0na00212g/d0na00212g1.pdf SuppInfo-PDF]
-* <span class="nopmbm">Wang&nbsp;L</span>, <span class="nopmbm">Lv&nbsp;H</span>, <span class="nopmbm">Liu&nbsp;L</span>, <span class="nopmbm">Zhang&nbsp;Q</span>, <span class="pmbm">Nakielski&nbsp;P</span>, <span class="nopmbm">Si&nbsp;Y</span>, <span class="nopmbm">Cao&nbsp;J</span>, <span class="nopmbm">Li&nbsp;X</span>, <span class="pmbm">Pierini&nbsp;F</span>, <span class="nopmbm">Yu&nbsp;J</span>, <span class="nopmbm">Ding&nbsp;B</span>. '''Electrospun nanofiber reinforced three-dimensional chitosan matrices: Architectural, mechanical and biological properties''', ''J&nbsp;Colloid Interface Sci'' <u>565</u>(1):416–425 (2020) [https://pubmed.ncbi.nlm.nih.gov/31982708 PubMed] [https://doi.org/10.1016/j.jcis.2020.01.016 CrossRef]
-* <span class="nopmbm">Martinez M</span>, <span class="nopmbm">Cooper CD</span>,  <span class="pmbm">Poma AB</span>, <span class="nopmbm">Guzman HV</span>. '''Free energies of the disassembly of viral capsids from a multiscale molecular simulation approach''', ''J&nbsp;Chem Inf Model'' <u>60</u>(2):974–981 (2020) [https://pubmed.ncbi.nlm.nih.gov/31873019 PubMed] [https://doi.org/10.1021/acs.jcim.9b00883 CrossRef]
-* <span class="nopmbm">Boopathi S</span>, <span class="pmbm">Poma AB</span>, <span class="nopmbm">Kolandaivel P</span>. '''Novel 2019 coronavirus structure, mechanism of action, antiviral drug promises and rule out against its treatment''', ''J&nbsp;Biomol Struct Dyn'' (2020) [https://pubmed.ncbi.nlm.nih.gov/32306836 PubMed] [https://dx.doi.org/10.1080/07391102.2020.1758788 CrossRef]
-* <span class="nopmbm">Ozen&nbsp;M</span>, <span class="pmbm">Lipniacki&nbsp;T</span>, <span class="nopmbm">Levchenko&nbsp;A</span>, <span class="nopmbm">Emamian&nbsp;ES</span>, <span class="nopmbm">Abdi&nbsp;A</span>. '''Modeling and measurement of signaling outcomes affecting decision making in noisy intracellular networks using machine learning methods''', ''Itegr&nbsp;Biol'' <u>12</u>(5):122–138 (2020) [https://pubmed.ncbi.nlm.nih.gov/32424393 PubMed] [https://doi.org/10.1093/intbio/zyaa009 CrossRef] |&nbsp; [https://academic.oup.com/ib/advance-article/doi/10.1093/intbio/zyaa009/5839897?guestAccessKey=e8e98b85-1c64-4cb5-ab89-21cb41aa3c0b PDF]
-===2019===
-* <span class="pmbm">Korczyk&nbsp;PM</span>, <span class="nopmbm">van&nbsp;Steijn&nbsp;V</span>, <span class="pmbm">Blonski&nbsp;S</span>, <span class="pmbm">Zaremba&nbsp;D</span>, <span class="nopmbm">Beattie&nbsp;DA</span>, <span class="nopmbm">Garstecki&nbsp;P</span>. '''Accounting for&nbsp;corner flow unifies the understanding of droplet formation in microfluidic channels''', ''Nat&nbsp;Commun'' <u>10</u>:2528 (2019) [https://www.ncbi.nlm.nih.gov/pubmed/31175303 PubMed] [https://doi.org/10.1038/s41467-019-10505-5 CrossRef] | [{{SERVER}}/publications/Korczyk-2019-NatCommun.pdf PDF]  [{{SERVER}}/publications/supplementary/Korczyk-2019-NatCommun-SuppInfo.pdf SuppInfo-PDF]
-* <span class="pmbm">Jetka T</span>, <span class="pmbm">Winarski T</span>, <span class="pmbm">Nienałtowski K</span>, <span class="pmbm">Błoński S</span>, <span class="pmbm">Komorowski M</span>. '''Information-theoretic  analysis  of  multivariate  single-cell  signaling  responses''', ''PLOS Comput Biol'' <u>15</u>(7):e1007132 (2019) [https://www.ncbi.nlm.nih.gov/pubmed/31299056 PubMed] [https://doi.org/10.1371/journal.pcbi.1007132 CrossRef] | [https://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1007132&type=printable PDF] [https://doi.org/10.1371/journal.pcbi.1007132.s001 SuppInfo-PDF]
-* <span class="nopmbm">Grabowski F</span>, <span class="nopmbm">Czyż P</span>, <span class="pmbm">Kochańczyk </span>, <span class="pmbm">Lipniacki T</span>. '''Limits to the rate of information transmission through the MAPK pathway''', ''J&nbsp;R&nbsp;Soc Interface'' <u>16</u>(152):20180792 (2019) [https://www.ncbi.nlm.nih.gov/pubmed/30836891 PubMed] [http://dx.doi.org/10.1098/rsif.2018.0792 CrossRef] | [https://royalsocietypublishing.org/doi/pdf/10.1098/rsif.2018.0792 PDF] [{{SERVER}}/software/cce SuppCode]
-* <span class="nopmbm">Bobrowski&nbsp;A</span>,  <span class="pmbm">Lipniacki&nbsp;T</span>. '''Robin-type boundary conditions in transition from reaction-diffusion equations in&nbsp;3D&nbsp;domains to equations in 2D domains'''. ''J&nbsp;Differ&nbsp;Equ'' <u>268</u>(1):239–271 (2019) [https://doi.org/10.1016/j.jde.2019.08.022 CrossRef]
-* <span class="pmbm">Komorowski M</span>, <span class="nopmbm">Tawfik DS</span>. '''The limited information capacity of cross-reactive sensors drives the evolutionary expansion of signaling''', ''Cell Syst'' <u>8</u>(1):76–85.e6 (2019) [https://www.ncbi.nlm.nih.gov/pubmed/30660612 PubMed] [http://doi.org/10.1016/j.cels.2018.12.006 CrossRef]
-* <span class="nopmbm">Billing U</span>, <span class="pmbm">Jetka T</span>, <span class="nopmbm">Nortmann L</span>, <span class="nopmbm">Wundrack N</span>, <span class="pmbm">Komorowski M</span>, <span class="nopmbm">Waldherr S</span>, <span class="nopmbm">Schaper F</span>, <span class="nopmbm">Dittrich A</span>. '''Robustness and information transfer within IL-6-induced JAK/STAT signalling''', ''Commun Biol'' <u>2</u>:27 (2019) [https://www.ncbi.nlm.nih.gov/pubmed/30675525 PubMed] [http://doi.org/10.1038/s42003-018-0259-4 CrossRef]
-* <span class="pmbm">Zaremba D</span>, <span class="pmbm">Blonski S</span>, <span class="nopmbm">Marijnissen MJ</span>, <span class="pmbm">Korczyk PM</span>. '''Fixing the direction of droplets in&nbsp;a&nbsp;bifurcating microfluidic junction''', ''Microfluid Nanofluid''  <u>23</u>:55 (2019) [https://doi.org/10.1007/s10404-019-2218-x CrossRef]
-* <span class="pmbm">Blonski S</span>, <span class="nopmbm">Pregowska A</span>, <span class="nopmbm">Michalek T</span>, <span class="nopmbm">Szczepanski J</span>. '''The use of Lempel-Ziv complexity to analyze turbulence and flow randomness based on velocity fluctuations''', ''Bull Polish Acad Sci–Tech Sci'' <u>67</u>(5):957–962 [https://dx.doi.org/10.24425/bpasts.2019.130876 CrossRef]
-* <span class="nopmbm">Senapati S</span>, <span class="pmbm">Poma AB</span>, <span class="nopmbm">Cieplak M</span>, <span class="nopmbm">Filipek S</span>, <span class="nopmbm">Park P S-H</span>. '''Differentiating between inactive and active states of rhodopsin by atomic force microscopy in native membranes''', ''Anal Chem'' <u>91</u>(11):7226–7235 (2019) [https://www.ncbi.nlm.nih.gov/pubmed/31074606 PubMed] [https://dx.doi.org/10.1021/acs.analchem.9b00546  CrossRef]
-* <span class="pmbm">Poma AB</span>, <span class="nopmbm">Guzman HV</span>, <span class="nopmbm">Li Ms</span>, <span class="nopmbm">Theodorakis PE</span>. '''Mechanical and thermodynamic properties of A&beta;<sub>42</sub>, A&beta;<sub>40</sub>, and &alpha;-synuclein fibrils: a coarse-grained method to complement experimental studies''', ''Beilstein J&nbsp;Nanotechnol'' <u>10</u>:500–513 (2019) [https://www.ncbi.nlm.nih.gov/pubmed/30873322 PubMed] [https://dx.doi.org/10.3762/bjnano.10.51 CrossRef]
-* <span class="nopmbm">Enayatiab MS</span>, <span class="nopmbm">Neisianya RE</span>, <span class="nopmbm">Sajkiewicz P</span>, <span class="nopmbm">Behzad T</span>, <span class="nopmbm">Denis P</span>, <span class="pmbm">Pierini F</span>. '''Effect of nanofiller incorporation on thermomechanical and toughness of poly(vinyl alcohol)-based electrospun nanofibrous bionanocomposites''', ''Theor Appl Fract Mech'' <u>99</u>:44–50 (2019) [http://doi.org/10.1016/j.tafmec.2018.11.006 CrossRef]
-* <span class="nopmbm">Lanzi M</span>, <span class="nopmbm">Salatelli E</span>, <span class="nopmbm">Marinelli M</span>, <span class="pmbm">Pierini F</span>. '''Effect of photocrosslinking of D-A thiophene copolymers on the performance of single-material solar cells''', ''Macromol Chem Phys'' 1900433 (2019) [http://dx.doi.org/10.1002/macp.201900433 CrossRef]
-* <span class="pmbm">Pierini F</span>, <span class="nopmbm">Lanzi M</span>. '''Effect of electron–acceptor content on the efficiency of regioregular double-cable thiophene copolymers in single-material organic solar cells''', ''ACS Omega'' <u>4</u>(22):19863–19874 (2019) [https://www.ncbi.nlm.nih.gov/pubmed/31788619 PubMed] [http://dx.doi.org/10.1021/acsomega.9b02790 CrossRef] | [http://pmbm.ippt.pan.pl/publications/Pierini-2019-ACSOmega.pdf PDF] [http://pmbm.ippt.pan.pl/publications/supplementary/Pierini-2019-ACSOmega-SuppText.pdf SuppInfo-PDF]
-* <span class="pmbm">Nakielski P</span>, <span class="pmbm">Pierini F</span>. '''Blood interactions with nano- and microfibers: recent advances, challenges and applications in nano- and microfibrous hemostatic agents''', ''Acta Biomater'' <u>84</u>:63–76 (2019) [http://www.ncbi.nlm.nih.gov/pubmed/30471475 PubMed] [http://doi.org/10.1016/j.actbio.2018.11.029 CrossRef]
-===2018===
-* <span class="pmbm">Czerkies M</span>, <span class="pmbm">Korwek Z</span>, <span class="pmbm">Prus W</span>, <span class="pmbm">Kochańczyk M</span>, <span class="pmbm">Jaruszewicz-Błońska J</span>, <span class="pmbm">Tudelska K</span>, <span class="pmbm">Błoński S</span>, <span class="nopmbm">Kimmel M</span>, <span class="nopmbm">Brasier AR</span>, <span class="pmbm">Lipniacki T</span>. '''Cell fate in antiviral response arises in the crosstalk of IRF, NF-κB and JAK/STAT pathways''', ''Nat Commun'' <u>9</u>:493 (2018) [http://www.ncbi.nlm.nih.gov/pubmed/29402958 PubMed] [http://dx.doi.org/10.1038/s41467-017-02640-8 CrossRef] | [http://pmbm.ippt.pan.pl/publications/Czerkies-2018-NatCommun.pdf PDF] [http://pmbm.ippt.pan.pl/publications/supplementary/Czerkies-2018-NatCommun-SuppInfo.pdf SuppInfo-PDF] [http://pmbm.ippt.pan.pl/publications/supplementary/Czerkies-2018-NatCommun-AllSuppData.zip SuppData] [http://pmbm.ippt.pan.pl/publications/supplementary/Czerkies-2018-NatCommun-AllMovies.zip SuppMovies] [http://pmbm.ippt.pan.pl/publications/supplementary/Czerkies-2018-NatCommun-ModelCode.zip SuppCode]
-* <span class="pmbm">Jetka T</span>, <span class="pmbm">Nienałtowski K</span>, <span class="nopmbm">Filippi S</span>, <span class="nopmbm">Stumpf MPH</span>, <span class="pmbm">Komorowski M</span>. '''An information-theoretic framework for deciphering pleiotropic and noisy biochemical signaling''', ''Nat Commun'' <u>9</u>:4591 (2018) [http://www.ncbi.nlm.nih.gov/pubmed/30389942 PubMed] [http://dx.doi.org/10.1038/s41467-018-07085-1 CrossRef] |&nbsp;[http://pmbm.ippt.pan.pl/publications/Jetka-2018-NatCommun.pdf PDF] [http://pmbm.ippt.pan.pl/publications/supplementary/Jetka-2018-NatCommun-SuppInfo.pdf SuppInfo-PDF]
-* <span class="nopmbm">Zuk PJ</span>, <span class="pmbm">Kochańczyk M</span>, <span class="pmbm">Lipniacki T</span>. '''Sampling rare events in stochastic reaction–diffusion systems within trajectory looping''', ''Phys Rev&nbsp;E'' <u>98</u>:022401 (2018) [http://www.ncbi.nlm.nih.gov/pubmed/30253540 PubMed] [http://doi.org/10.1103/PhysRevE.98.022401 CrossRef] | [http://pmbm.ippt.pan.pl/publications/Zuk-2018-PhysRevE-MS.pdf PDF-ms] [http://pmbm.ippt.pan.pl/software/looping Www]
-* <span class="pmbm">Kazmierczak B</span>, <span class="nopmbm">Tsai J-C</span>, <span class="pmbm">Bialecki S</span>. '''The propagation phenomenon of solutions of a parabolic problem on the sphere''', ''Math Model Meth Appl Sci'' <u>28</u>(10):2001–2067 (2018) [http://doi.org/10.1142/S0218202518500483 CrossRef]
-* <span class="pmbm">Zaremba D</span>, <span class="pmbm">Błoński S</span>, <span class="nopmbm">Jachimek M</span>, <span class="nopmbm">Marijnissen MJ</span>, <span class="nopmbm">Jakieła S</span>, <span class="pmbm">Korczyk PM</span>. '''Investigations of modular microfluidic geometries for passive manipulations on droplets''', ''Bull Polish Acad Sci–Tech Sci'' <u>66</u>(2):139–149 (2018) [http://doi.org/10.24425/119068 CrossRef]
-* <span class="nopmbm">Skłodowska K</span>, <span class="nopmbm">Dębski PR</span>, <span class="nopmbm">Michalski JA</span>, <span class="pmbm">Korczyk PM</span>, <span class="nopmbm">Dolata M</span>, <span class="nopmbm">Zając M</span>, <span class="nopmbm">Jakiela S</span>. '''Simultaneous measurement of viscosity and optical density of bacterial growth and death in a microdroplet''', ''Micromachines''  <u>9</u>(5):251 (2018) [http://www.ncbi.nlm.nih.gov/pubmed/30424184 PubMed] [http://dx.doi.org/10.3390/mi9050251 CrossRef]
-* <span class="nopmbm">Debski PR</span>, <span class="nopmbm">Sklodowska K</span>, <span class="nopmbm">Michalski JA</span>, <span class="pmbm">Korczyk PM</span>, <span class="nopmbm">Dolata M</span>, <span class="nopmbm">Jakiela S</span>. '''Continuous recirculation of microdroplets in a closed loop tailored for screening of bacteria cultures''', ''Micromachines'' <u>9</u>(9):469 [http://www.ncbi.nlm.nih.gov/pubmed/30424402 PubMed] [http://doi.org/10.3390/mi9090469 CrossRef]
-* <span class="pmbm">Pierini F</span>, <span class="pmbm">Nakielski P</span>, <span class="nopmbm">Urbanek O</span>, <span class="pmbm">Pawłowska S</span>, <span class="nopmbm">Lanzi M</span>, <span class="nopmbm">De Sio L</span>, <span class="pmbm">Kowalewski TA</span>. '''Polymer-based nanomaterials for photothermal therapy: from light-responsive to multifunctional nanoplatforms for synergistically combined technologies''', ''Biomacromolecules'' <u>19</u>(11):4147–4167 (2018) [http://www.ncbi.nlm.nih.gov/pubmed/30230317 PubMed] [http://dx.doi.org/10.1021/acs.biomac.8b01138 CrossRef]
-* <span class="pmbm">Pawłowska S</span>, <span class="pmbm">Kowalewski TA</span>, <span class="pmbm">Pierini F</span>. '''Fibrous polymer nanomaterials for biomedical applications and their transport by fluids: an overview''', ''Soft Matter'' 14(42):8421–8444 (2018) [http://www.ncbi.nlm.nih.gov/pubmed/30339174 PubMed] [http://doi.org/10.1039/C8SM01269E CrossRef]
-* <span class="nopmbm">Lanzi M</span>, <span class="nopmbm">Salatelli E</span>, <span class="nopmbm">Giorgini L</span>, <span class="nopmbm">Marinelli M</span>, <span class="pmbm">Pierini F</span>. '''Effect of the incorporation of an Ag nanoparticle interlayer on the photovoltaic performance of green bulk heterojunction water-soluble polythiophene solar cells''', ''Polymer'' <u>149</u>:273–285 (2018) [http://doi.org/10.1016/j.polymer.2018.07.012 CrossRef]
-* <span class="nopmbm">Enayati MS</span>, <span class="nopmbm">Behzad T</span>, <span class="nopmbm">Sajkiewicz PŁ</span>, <span class="nopmbm">Bagheri R</span>, <span class="nopmbm">Ghasemi-Mobarakeh L</span>, <span class="pmbm">Pierini F</span>. '''Theoretical and experimental study of the stiffness of electrospun composites of poly(vinyl alcohol), cellulose nanofibers, and nanohydroxy apatite''', ''Cellulose'' <u>25</u>(1):65–75 (2018) [http://doi.org/10.1007/s10570-017-1601-6 CrossRef]
-* <span class="nopmbm">Urbanek O</span>, <span class="pmbm">Pierini F</span>, <span class="nopmbm">Choińska E</span>, <span class="nopmbm">Sajkiewicz P</span>, <span class="nopmbm">Bil M</span>, <span class="nopmbm">Święszkowski W</span>. '''Effect of hydroxyapatite nanoparticles addition on structure properties of poly(L-lactide-<i>co</i>-glycolide) after gamma sterilization''', ''Polym Compos'' <u>39</u>(4):1024–1031 (2018; e-pub 2016) [http://dx.doi.org/10.1002/pc.24028 CrossRef]
-* <span class="nopmbm">Małolepszy A</span>, <span class="pmbm">Błonski S</span>, <span class="nopmbm">Chrzanowska-Giżyńska J</span>, <span class="nopmbm">Wojasiński M</span>, <span class="nopmbm">Płocinski T</span>, <span class="nopmbm">Stobinski&nbsp;L</span>, <span class="nopmbm">Szymanski&nbsp;Z</span>. '''Fluorescent carbon and graphene oxide nanoparticles synthesized by the laser ablation in liquid''', &nbsp;''Appl&nbsp;Phys&nbsp;A–Mater Sci Process''  <u>124</u>:282 (2018) [http://doi.org/10.1007/s00339-018-1711-5 CrossRef]
-===2017===
-* <span class="pmbm">Tudelska K</span>, <span class="pmbm">Markiewicz J</span>, <span class="pmbm">Kochańczyk M</span>, <span class="pmbm">Czerkies M</span>, <span class="pmbm">Prus W</span>, <span class="pmbm">Korwek Z</span>, <span class="nopmbm">Abdi A</span>, <span class="pmbm">Błoński&nbsp;S</span>, <span class="pmbm">Kaźmierczak B</span>, <span class="pmbm">Lipniacki T</span>. '''Information processing in the NF-κB pathway''', ''Sci&nbsp;Rep'' <u>7</u>:15926 (2017) [http://www.ncbi.nlm.nih.gov/pubmed/29162874 PubMed] [http://doi.org/10.1038/s41598-017-16166-y CrossRef] | [http://www.nature.com/articles/s41598-017-16166-y.pdf PDF] [http://pmbm.ippt.pan.pl/publications/supplementary/Tudelska-2017-SciRep-SuppInfo.pdf SuppInfo-PDF] [http://pmbm.ippt.pan.pl/publications/supplementary/Tudelska-2017-SciRep-SuppDataset1.zip SuppCode-BNGL] [http://pmbm.ippt.pan.pl/publications/supplementary/Tudelska-2017-SciRep-SuppDataset2.zip SuppCode-Py]
-* <span class="pmbm">Jaruszewicz-Błońska J</span>, <span class="pmbm">Lipniacki T</span>. '''Genetic toggle switch controlled by bacterial growth rate''', ''BMC Syst Biol'' <u>11</u>:117 (2017) [http://www.ncbi.nlm.nih.gov/pubmed/29197392 PubMed] [http://doi.org/10.1186/s12918-017-0483-4 CrossRef]
-* <span class="nopmbm">Varga A</span>, <span class="nopmbm">Ehrenreiter K</span>, <span class="nopmbm">Aschenbrenner B</span>, <span class="pmbm">Kocieniewski P</span>, <span class="pmbm">Kochanczyk M</span>, <span class="pmbm">Lipniacki&nbsp;T</span>, <span class="nopmbm">Baccarini&nbsp;M</span>. '''RAF1/BRAF dimerization integrates the signal from RAS to ERK and&nbsp;ROKα''', ''Sci&nbsp;Signal'' <u>10</u>(469):eaai8482 (2017) [http://www.ncbi.nlm.nih.gov/pubmed/28270557 PubMed] [http://dx.doi.org/10.1126/scisignal.aai8482 CrossRef] | [{{SERVER}}/publications/supplementary/Varga-2017-SciSignal-SuppCode.bngl SuppCode-BioNetGen]
-* <span class="pmbm">Kochańczyk M</span>, <span class="pmbm">Kocieniewski P</span>, <span class="nopmbm">Kozłowska E</span>, <span class="pmbm">Jaruszewicz-Błońska J</span>, <span class="nopmbm">Sparta B</span>, <span class="nopmbm">Pargett&nbsp;M</span>, <span class="nopmbm">Albeck&nbsp;JG</span>, <span class="nopmbm">Hlavacek WS</span>, <span class="pmbm">Lipniacki T</span>. '''Relaxation oscillations and hierarchy of feedbacks in MAPK signaling''', ''Sci Rep'' <u>7</u>:38244 (2017) [http://www.ncbi.nlm.nih.gov/pubmed/28045041 PubMed] [http://dx.doi.org/10.1038/srep38244 CrossRef] | [http://www.nature.com/articles/srep38244.pdf PDF] [{{SERVER}}/publications/supplementary/Kochanczyk-2017-SciRep-SuppInfo.pdf SuppInfo-PDF] [{{SERVER}}/publications/supplementary/Kochanczyk-2017-SciRep-SuppCodeBionetgen-UPDATED.zip SuppCode-BNG] [{{SERVER}}/publications/supplementary/Kochanczyk-2017-SciRep-SuppCodeMatlabMatcont.zip SuppCode-MatCont] [{{SERVER}}/publications/supplementary/Kochanczyk-2017-SciRep-SuppCodeBionetgenNoisyEGFR.zip SuppCode-BNG-noisy] [{{SERVER}}/publications/supplementary/Kochanczyk-2017-SciRep-SuppCodeComsol.zip SuppCode-Comsol] [{{SERVER}}/publications/supplementary/Kochanczyk-2017-SciRep-Movie.mp4 SuppMovie]
-* <span class="pmbm">Kochańczyk M</span>, <span class="nopmbm">Hlavacek WS</span>, <span class="pmbm">Lipniacki T</span>. '''<span style="font-variant:small-caps">Spatkin</span>: a simulator for rule-based modeling of biomolecular site dynamics on surfaces''', ''Bioinformatics'' (2017) <u>33</u>(22):3667–3669 [http://www.ncbi.nlm.nih.gov/pubmed/29036531 PubMed] [http://doi.org/10.1093/bioinformatics/btx456 CrossRef] [http://pmbm.ippt.pan.pl/software/spatkin Www]
-* <span class="nopmbm">Habibi I</span>, <span class="nopmbm">Cheong R</span>, <span class="pmbm">Lipniacki T</span>, <span class="nopmbm">Levchenko A</span>, <span class="nopmbm">Emamian ES</span>, <span class="nopmbm">Abdi A</span>. '''Computation and measurement of cell decision making errors using single cell data''', ''PLOS Comput Biol'' <u>13</u>(4):e1005436 (2017) [http://www.ncbi.nlm.nih.gov/pubmed/28379950 PubMed] [http://dx.doi.org/10.1371/journal.pcbi.1005436 CrossRef]
-* <span class="pmbm">Białecki S</span>, <span class="pmbm">Kaźmierczak B</span>, <span class="pmbm">Lipniacki T</span>. '''Polarization of concave domains by traveling wave pinning''', ''PLOS One'' <u>12</u>:e0190372 (2017) [http://www.ncbi.nlm.nih.gov/pubmed/29284045 PubMed] [http://dx.doi.org/10.1371/journal.pone.0190372 CrossRef]
-* <span class="pmbm">Bialecki S</span>, <span class="pmbm">Kaźmierczak B</span>, <span class="pmbm">Nowicka D</span>, <span class="nopmbm">Tsai J-C</span>. '''Regularity of solutions to a reaction–diffusion equation on the sphere: the Legendre series approach''', ''Math&nbsp;Meth Appl Sci'' <u>40</u>(14):5349–5369 (2017) [http://dx.doi.org/10.1002/mma.4390 CrossRef]
-* <span class="nopmbm">Adimy M</span>, <span class="nopmbm">Chekroun A</span>, <span class="pmbm">Kaźmierczak B</span>. '''Traveling waves in a coupled reaction–diffusion and difference model of hematopoiesis''', ''J&nbsp;Differ Equ'' <u>262</u>(7):4085–4128 (2017) [http://dx.doi.org/10.1016/j.jde.2016.12.009 CrossRef]
-* <span class="nopmbm">Bobrowski A</span>, <span class="pmbm">Kaźmierczak B</span>, <span class="nopmbm">Kunze M</span>. '''An averaging principle for fast diffusions in domains separated by semi-permeable membranes''', ''Math Model Meth Appl Sci'' <u>27</u>(4):663–706 (2017) [http://dx.doi.org/10.1142/S0218202517500130 CrossRef] [http://arxiv.org/abs/1603.00494 arXiv]
-* <span class="nopmbm">Martincuks A</span>, <span class="pmbm">Andryka K</span>, <span class="nopmbm">Küster A</span>, <span class="nopmbm">Schmitz-Van de Leur H</span>, <span class="pmbm">Komorowski M</span>, <span class="nopmbm">Müller-Newen&nbsp;G</span>. '''Nuclear translocation of STAT3 and NF-κB are independent of each other but NF-κB supports expression and activation of STAT3''', ''Cell Signal'' <u>32</u>:36–47 (2017) [http://www.ncbi.nlm.nih.gov/pubmed/28089769 PubMed] [http://dx.doi.org/10.1016/j.cellsig.2017.01.006 CrossRef]
-* <span class="pmbm">Pawłowska S</span>, <span class="pmbm">Nakielski P</span>, <span class="pmbm">Pierini F</span>, <span class="pmbm">Piechocka IK</span>, <span class="pmbm">Zembrzycki K</span>, <span class="pmbm">Kowalewski TA</span>. '''Lateral migration of electrospun hydrogel nanofilaments in an oscillatory flow''', ''PLOS One'' <u>12</u>(11):e0187815  [http://www.ncbi.nlm.nih.gov/pubmed/29141043 PubMed] [http://doi.org/10.1371/journal.pone.0187815 CrossRef]
-* <span class="pmbm">Pierini F</span>, <span class="nopmbm">Lanzi M</span>, <span class="pmbm">Nakielski P</span>, <span class="pmbm">Pawłowska S</span>, <span class="nopmbm">Urbanek O</span>, <span class="pmbm">Zembrzycki K</span>, <span class="pmbm">Kowalewski TA</span>. '''Single-material organic solar cells based on electrospun fullerene-grafted polythiophene nanofibers''', ''Macromolecules'' <u>50</u>(13):4972–81 (2017) [http://dx.doi.org/10.1021/acs.macromol.7b00857 CrossRef]
-* <span class="pmbm">Pierini F</span>, <span class="nopmbm">Lanzi M</span>, <span class="pmbm">Nakielski P</span>, <span class="pmbm">Kowalewski TA</span>. '''Electrospun polyaniline-based composite nanofibers: Tuning the electrical conductivity by tailoring the structure of thiol-protected metal nanoparticles''', ''J&nbsp;Nanomater'' <u>2017</u>:6142140 (2017) [http://doi.org/10.1155/2017/6142140 CrossRef]
-* <span class="nopmbm">Urbanek O</span>, <span class="nopmbm">Sajkiewicz P</span>, <span class="pmbm">Pierini F</span>. '''The effect of polarity in the electrospinning process on PCL/chitosan nanofibres' structure, properties and efficiency of surface modification''', ''Polymer'' <u>124</u>:168–75 (2017) [http://dx.doi.org/10.1016/j.polymer.2017.07.064 CrossRef]
-* <span class="nopmbm">Urbanek O</span>, <span class="nopmbm">Sajkiewicz P</span>, <span class="pmbm">Pierini F</span>, <span class="pmbm">Czerkies M</span>, <span class="nopmbm">Kołbuk D</span>. '''Structure and properties of&nbsp;polycaprolactone/chitosan nonwovens tailored by solvent systems''', ''Biomed Mater'' <u>12</u>:015020  (2017) [http://www.ncbi.nlm.nih.gov/pubmed/28157717 PubMed] [http://dx.doi.org/10.1088/1748-605X/aa5647 CrossRef]
-* <span class="nopmbm">Lanzi M</span>, <span class="nopmbm">Salatelli E</span>, <span class="nopmbm">Di-Nicola FP</span>, <span class="nopmbm">Zuppiroli L</span>, <span class="pmbm">Pierini F</span>. '''A new photocrosslinkable oligothiophene for organic solar cells with enhanced stability''', ''Mater Chem Phys'' <u>186</u>:98–107 (2017) [http://dx.doi.org/10.1016/j.matchemphys.2016.10.034 CrossRef]
-* <span class="nopmbm">Lanzi M</span>, <span class="nopmbm">Salatelli E</span>, <span class="nopmbm">Giorgini L</span>, <span class="nopmbm">Mucci A</span>, <span class="pmbm">Pierini F</span>, <span class="nopmbm">Di-Nicola F</span>. '''Water-soluble polythiophenes as efficient charge-transport layers for the improvement of photovoltaic performance in bulk heterojunction polymeric solar cells''', ''Eur Polymer&nbsp;J'' <u>97</u>:378–388 (2017) [http://doi.org/10.1016/j.eurpolymj.2017.10.032 CrossRef]
-===2016===
-* <span class="pmbm">Hat B</span>, <span class="pmbm">Kochańczyk M</span>, <span class="pmbm">Bogdał MN</span>, <span class="pmbm">Lipniacki T</span>. '''Feedbacks, bifurcations, and cell fate decision-making in the p53 system''', ''PLOS Comput Biol'' <u>12</u>(2):e1004787 (2016) [http://www.ncbi.nlm.nih.gov/pubmed/26928575 PubMed] [http://dx.doi.org/10.1371/journal.pcbi.1004787 CrossRef] | [{{SERVER}}/publications/Hat-2016-PLOSComputBiol.pdf PDF] [{{SERVER}}/publications/supplementary/Hat-2016-PLOSComputBiol-SuppText.pdf SuppText] [{{SERVER}}/publications/supplementary/Hat-2016-PLOSComputBiol-SuppFigures.zip SuppFigs]  [{{SERVER}}/publications/supplementary/Hat-2016-PLOSComputBiol-SuppCode.zip SuppCode]
-* <span class="pmbm">Korwek Z</span>, <span class="pmbm">Tudelska K</span>, <span class="nopmbm">Nałęcz-Jawecki P</span>, <span class="pmbm">Czerkies M</span>, <span class="pmbm">Prus W</span>, <span class="pmbm">Markiewicz J</span>, <span class="pmbm">Kochańczyk&nbsp;M</span>, <span class="pmbm">Lipniacki T</span>. '''Importins promote high-frequency NF-&kappa;B oscillations increasing information channel capacity''', ''Biol Direct'' <u>11</u>:61 (2016) [http://www.ncbi.nlm.nih.gov/pubmed/27835978 PubMed] [http://dx.doi.org/10.1186/s13062-016-0164-z CrossRef] | [{{SERVER}}/publications/Korwek-2016-BiolDirect.pdf PDF] [{{SERVER}}/publications/supplementary/Korwek-2016-BiolDirect-Fig1d-HiRes.pdf Scheme-PDF] [{{SERVER}}/publications/supplementary/Korwek-2016-BiolDirect-AddFile1-ModelDescription.pdf SuppModelInfo-PDF] [{{SERVER}}/publications/supplementary/Korwek-2016-BiolDirect-AddFile2-NFkBImportinsModel.bngl SuppModelCode-BNGL] [{{SERVER}}/publications/supplementary/Korwek-2016-BiolDirect-AddFile3-SuppFigs-S1-to-S7.pdf SuppFigs-PDF] [{{SERVER}}/publications/supplementary/Korwek-2016-BiolDirect-AddFiles4567-SuppImages.zip SuppImages-ZIP]
-* <span class="pmbm">Chatterjee P</span>, <span class="pmbm">Kaźmierczak B</span>. '''Eigenfunction approach to transient patterns in a model of chemotaxis''', ''Math Model Nat Phenom'' <u>11</u>(2):44–62 (2016) [http://dx.doi.org/10.1051/mmnp/201611204 CrossRef]
-* <span class="pmbm">Pierini F</span>, <span class="pmbm">Zembrzycki K</span>, <span class="pmbm">Nakielski P</span>, <span class="pmbm">Pawłowska S</span>, <span class="pmbm">Kowalewski TA</span>. '''Atomic force microscopy combined with optical tweezers (AFM/OT)''', ''Meas&nbsp;Sci Technol'' <u>27</u>:025904 (2016) [http://dx.doi.org/10.1088/0957-0233/27/2/025904 CrossRef]
-* <span class="pmbm">Pierini F</span>, <span class="nopmbm">Lanzi M</span>, <span class="pmbm">Nakielski P</span>, <span class="pmbm">Pawłowska S</span>, <span class="pmbm">Zembrzycki K</span>, <span class="pmbm">Kowalewski TA</span>. '''Electrospun poly(3-hexylthiophene)/poly(ethylene oxide)/graphene oxide composite nanofibers: effects of graphene oxide reduction''', ''Polym Adv Technol'' <u>27</u>(11):1465–1475 (2016) [http://dx.doi.org/10.1002/pat.3816 CrossRef]
-* <span class="nopmbm">Adamowicz J</span>, <span class="nopmbm">Pokrywczyńska M</span>, <span class="nopmbm">Tworkiewicz J</span>, <span class="nopmbm">Kowalczyk T</span>, <span class="nopmbm">van Breda SV</span>, <span class="nopmbm">Tyloch D</span>, <span class="nopmbm">Kloskowski T</span>, <span class="nopmbm">Bodnar M</span>, <span class="nopmbm">Skopinska-Wisniewska J</span>, <span class="nopmbm">Marszałek A</span>, <span class="nopmbm">Frontczak-Baniewicz M</span>, <span class="pmbm">Kowalewski TA</span>, <span class="nopmbm">Drewa T</span>. '''New amniotic membrane based biocomposite for future application in reconstructive urology''', ''PLOS One'' <u>11</u>(1):e0146012 (2016) [http://www.ncbi.nlm.nih.gov/pubmed/26766636 PubMed] [http://dx.doi.org/10.1371/journal.pone.0146012 CrossRef]
-===2015===
-* <span class="pmbm">Szymańska P</span>, <span class="nopmbm">Martin KR</span>, <span class="nopmbm">MacKeigan JP</span>,  <span class="nopmbm">Hlavacek WS</span>, <span class="pmbm">Lipniacki T</span>. '''Computational analysis of an autophagy/translation switch based on mutual inhibition of mTORC1 and ULK1''', ''PLOS One'' <u>10</u>(3):e0116550 (2015) [http://www.ncbi.nlm.nih.gov/pubmed/25761126 PubMed] [http://dx.doi.org/10.1371/journal.pone.0116550 CrossRef] | [{{SERVER}}/publications/Szymanska-2015-PLOSOne.pdf PDF] [{{SERVER}}/publications/supplementary/Szymanska-2015-PLOSOne-SuppFileS1.bngl.txt supp-BNGL] [{{SERVER}}/publications/supplementary/Szymanska-2015-PLOSOne-SuppFileS2.pdf supp-PDF]
-* <span class="pmbm">Nałęcz-Jawecki P</span>, <span class="pmbm">Szymańska P</span>, <span class="pmbm">Kochańczyk M</span>, <span class="nopmbm">Miękisz J</span>, <span class="pmbm">Lipniacki T</span>. '''	Effective reaction rates for diffusion-limited reaction cycles''', ''J&nbsp;Chem Phys'' <u>143</u>(21):215102 (2015) [http://www.ncbi.nlm.nih.gov/pubmed/26646890 PubMed] [http://dx.doi.org/10.1063/1.4936131 CrossRef] | [{{SERVER}}/publications/Nalecz-Jawecki-2015-JChemPhys-MS.pdf PDF-ms]
-* <span class="pmbm">Szymańska P</span>, <span class="pmbm">Kochańczyk M</span>, <span class="nopmbm">Miększ J</span>, <span class="pmbm">Lipniacki T</span>. '''Effective reaction rates in diffusion-limited phosphorylation–dephosphorylation cycles''', ''Phys&nbsp;Rev&nbsp;E'' <u>91</u>:022702 (2015) [http://www.ncbi.nlm.nih.gov/pubmed/25768526 PubMed] [http://dx.doi.org/10.1103/PhysRevE.91.022702 CrossRef] | [{{SERVER}}/publications/Szymanska-2015-PhysRevE-MS.pdf PDF-ms]
-* <span class="pmbm">Nienałtowski K</span>, <span class="pmbm">Włodarczyk M</span>, <span class="pmbm">Lipniacki T</span>, <span class="pmbm">Komorowski M</span>. '''Clustering reveals limits of parameter identifiability in multi-parameter models of biochemical dynamics''', ''BMC Syst Biol'' <u>9</u>:65 (2015) [http://www.ncbi.nlm.nih.gov/pubmed/26415494 PubMed] [http://dx.doi.org/10.1186/s12918-015-0205-8 CrossRef] | [https://bmcsystbiol.biomedcentral.com/track/pdf/10.1186/s12918-015-0205-8 PDF] [https://static-content.springer.com/esm/art%3A10.1186%2Fs12918-015-0205-8/MediaObjects/12918_2015_205_MOESM1_ESM.pdf Supp-PDF] [http://sysbiosig.org/?wpdmdl=1094 Supp-Code]
-* <span class="nopmbm">Kellogg RA</span>, <span class="nopmbm">Tian C</span>, <span class="pmbm">Lipniacki T</span>, <span class="nopmbm">Quake SR</span>, <span class="nopmbm">Tay S</span>. '''Digital signaling decouples activation probability and population heterogeneity''', ''eLife'' <u>4</u>:e08931 (2015)  [http://www.ncbi.nlm.nih.gov/pubmed/26488364 PubMed] [http://dx.doi.org/10.7554/eLife.08931 CrossRef] | [{{SERVER}}/publications/Kellog-2015-eLife.pdf PDF]
-* <span class="pmbm">Białecki S</span>, <span class="pmbm">Kaźmierczak B</span>, <span class="nopmbm">Tsai J-C</span>. '''Stationary waves on the sphere''', ''SIAM J Appl Math'' <u>75</u>(4):1761–1788 (2015) [http://dx.doi.org/10.1137/140999384 CrossRef]
-* <span class="pmbm">Szymańska P</span>, <span class="nopmbm">Gritti N</span>, <span class="nopmbm">Keegstra J</span>, <span class="nopmbm">Soltani M</span>, <span class="nopmbm">Munsky B</span>. '''Using noise to control heterogeneity of isogenic populations in homogenous environments''', ''Phys&nbsp;Biol'' <u>12</u>:045003 (2015) [http://www.ncbi.nlm.nih.gov/pubmed/26086389 PubMed] [http://dx.doi.org/10.1088/1478-3975/12/4/045003 CrossRef]
-* <span class="nopmbm">Wronowska W</span>, <span class="nopmbm">Charzyńska A</span>, <span class="pmbm">Nienałtowski K</span>, <span class="nopmbm">Gambin A</span>. '''Computational modeling of sphingolipid metabolism''', ''BMC Syst Biol'' <u>9</u>:47 (2015) [https://www.ncbi.nlm.nih.gov/pubmed/26275400 PubMed] [http://dx.doi.org/10.1186/s12918-015-0176-9 CrossRef]
-* <span class="nopmbm">Aliper AM</span>, <span class="nopmbm">Csoka AB</span>, <span class="nopmbm">Buzdin A</span>, <span class="pmbm">Jetka T</span>, <span class="nopmbm">Roumiantsev S</span>, <span class="nopmbm">Moskalev A</span>, <span class="nopmbm">Zhavoronkov A</span>. '''Signaling pathway activation drift during aging: Hutchinson-Gilford Progeria Syndrome fibroblasts are comparable to normal middle-age and old-age cells''', ''Aging'' <u>7</u>(1):26–37 [http://www.ncbi.nlm.nih.gov/pubmed/25587796 PubMed]
-* <span class="pmbm">Korczyk PM</span>, <span class="nopmbm">Dolega ME</span>, <span class="nopmbm">Jakiela S</span>, <span class="nopmbm">Jankowski P</span>, <span class="nopmbm">Makulska S</span>, <span class="nopmbm">Garstecki P</span>. '''Scaling up the throughput of synthesis and extraction in droplet microfluidic reactors''', ''J&nbsp;Flow Chem'' <u>5</u>(2):110–118 (2015) [http://dx.doi.org/10.1556/jfc-d-14-00038 CrossRef]
-* <span class="nopmbm">Samborski A</span>, <span class="nopmbm">Jankowski P</span>, <span class="nopmbm">Węgrzyn J</span>, <span class="nopmbm">Michalski JA</span>, <span class="pmbm">Pawłowska S</span>, <span class="nopmbm">Jakieła S</span>, <span class="nopmbm">Garstecki&nbsp;P</span>. '''Blood diagnostics using sedimentation to extract plasma on a fully integrated point-of-care microfluidic system''', ''Eng Life Sci'' <u>15</u>(3):333–339 (2015) [http://dx.doi.org/10.1002/elsc.201400077 CrossRef]
-* <span class="pmbm">Nakielski P</span>, <span class="nopmbm">Kowalczyk T</span>, <span class="pmbm">Zembrzycki K</span>, <span class="pmbm">Kowalewski TA</span>. '''Experimental and numerical evaluation of drug release from nanofiber mats to brain tissue''', ''J&nbsp;Biomed Mater Res&nbsp;B Appl Biomater'' <u>103</u>(2):282–291 (2015; e-pub 2014) [http://www.ncbi.nlm.nih.gov/pubmed/24819674 PubMed] [http://dx.doi.org/10.1002/jbm.b.33197 CrossRef]
-* <span class="pmbm">Nakielski P</span>, <span class="pmbm">Pawłowska S</span>, <span class="pmbm">Pierini F</span>, <span class="nopmbm">Liwińska W</span>, <span class="pmbm">Hejduk P</span>, <span class="pmbm">Zembrzycki K</span>, <span class="nopmbm">Zabost E</span>, <span class="pmbm">Kowalewski TA</span>. '''Hydrogel nanofilaments via core-shell electrospinning''', ''PLOS One'' <u>10</u>(6):e0129816 (2015) [http://www.ncbi.nlm.nih.gov/pubmed/26091487 PubMed] [http://dx.doi.org/10.1371/journal.pone.0129816 CrossRef] [http://fluid.ippt.pan.pl/pnakiel/PLOS/ Supp] [http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0133458 Correction]
-* <span class="nopmbm">Noszczyk BH</span>, <span class="nopmbm">Kowalczyk T</span>, <span class="nopmbm">Łyżniak&nbsp;M</span>, <span class="pmbm">Zembrzycki&nbsp;K</span>, <span class="nopmbm">Mikułowski&nbsp;G</span>, <span class="nopmbm">Wysocki&nbsp;J</span>, <span class="nopmbm">Kawiak&nbsp;J</span>, <span class="nopmbm">Pojda Z</span>. '''Biocompatibility of electrospun human albumin: A pilot study''', ''Biofabrication'' <u>7</u>(1):015011 (2015) [http://www.ncbi.nlm.nih.gov/pubmed/25727172 PubMed] [http://dx.doi.org/10.1088/1758-5090/7/1/015011 CrossRef]
-* <span class="nopmbm">Sielamowicz I</span>, <span class="nopmbm">Czech A</span>, <span class="pmbm">Kowalewski&nbsp;TA</span>. '''Comparative analysis of empirical descriptions of eccentric flow in silo model by the linear and nonlinear regressions'''. ''Powder Technol'' <u>270</u>:393–410 (2015) [http://dx.doi.org/10.1016/j.powtec.2014.10.007 CrossRef]
-* <span class="pmbm">Pierini F</span>, <span class="nopmbm">Lanzi M</span>, <span class="nopmbm">Lesci IG</span>, <span class="nopmbm">Rover N</span>. '''Comparison between inorganic geomimetic chrysotile and multiwalled carbon nanotubes in the preparation of one-dimensional conducting polymer nanocomposites''', ''Fiber Polym'' <u>16</u>(2):426–433 (2015) [http://dx.doi.org/10.1007/s12221-015-0426-x CrossRef]
-* <span class="nopmbm">Jarecki L</span>, <span class="pmbm">Błoński S</span>, <span class="nopmbm">Zachara Z</span>. '''Modeling of pneumatic melt drawing of poly-L-lactide fibers in the Laval nozzle''', ''Ind&nbsp;Eng Chem Res'' (2015) <u>54</u>(43):10796–10810 [http://dx.doi.org/10.1021/acs.iecr.5b02375 CrossRef]
-* <span class="nopmbm">Chrzanowska J</span>, <span class="nopmbm">Hoffman J</span>, <span class="nopmbm">Małolepszy A</span>, <span class="nopmbm">Mazurkiewicz M</span>, <span class="pmbm">Kowalewski TA</span>, <span class="nopmbm">Szymanski Z</span>, <span class="nopmbm">Stobinski L</span>. '''Synthesis of carbon nanotubes by the laser ablation method: Effect of laser wavelength''', ''Phys Status Solidi B'' <u>252</u>(8):1860–1867 (2015) [http://dx.doi.org/10.1002/pssb.201451614 CrossRef]
-* <span class="nopmbm">Oliferuk W</span>, <span class="nopmbm">Maj M</span>, <span class="pmbm">Zembrzycki K</span>. '''Determination of the energy storage rate distribution in the area of strain localization using infrared and visible imaging''', ''Exp Mech'' <u>55</u>:753–760 (2015) [http://dx.doi.org/10.1007/s11340-013-9819-1 CrossRef]
-===2014===
-* <span class="pmbm">Jaruszewicz J</span>, <span class="nopmbm">Kimmel M</span>, <span class="pmbm">Lipniacki T</span>. '''Stability of bacterial toggle switches is enhanced by cell-cycle lengthening by several orders of magnitude''', ''Phys Rev&nbsp;E'' <u>89</u>(2):022710 (2014) [http://www.ncbi.nlm.nih.gov/pubmed/25353512 PubMed] [http://dx.doi.org/10.1103/PhysRevE.89.022710 CrossRef] | [{{SERVER}}/publications/Jaruszewicz-2014-PhysRevE-MS.pdf PDF-ms]
-* <span class="nopmbm">Bertolusso R</span>, <span class="nopmbm">Tian B</span>, <span class="nopmbm">Zhao Y</span>, <span class="nopmbm">Vergara L</span>, <span class="nopmbm">Sabree A</span>, <span class="nopmbm">Iwanaszko M</span>, <span class="pmbm">Lipniacki T</span>, <span class="nopmbm">Brasier&nbsp;AR</span>, <span class="nopmbm">Kimmel M</span>. '''Dynamic cross talk model of the epithelial innate immune response to double-stranded RNA stimulation: Coordinated dynamics emerging from cell-level noise''', ''PLOS One'' <u>9</u>(4):e93396 (2014) [http://www.ncbi.nlm.nih.gov/pubmed/24710104 PubMed] [http://dx.doi.org/10.1371/journal.pone.0093396 CrossRef] | [http://www.plosone.org/article/fetchObject.action?uri=info%3Adoi%2F10.1371%2Fjournal.pone.0093396&representation=PDF PDF] [{{SERVER}}/publications/supplementary/Bertolusso-2014-PLOSOne-Supp.pdf Supp-PDF]
-* <span class="pmbm">Jetka T</span>, <span class="nopmbm">Charzynska A</span>, <span class="nopmbm">Gambin A</span>, <span class="nopmbm">Stumpf MPH</span>, <span class="pmbm">Komorowski M</span>. '''StochDecomp&mdash;Matlab package for noise decomposition in stochastic biochemical systems''', ''Bioinformatics'' <u>30</u>(1):137–138 (2014; e-pub 2013) [http://www.ncbi.nlm.nih.gov/pubmed/24191070 PubMed] [http://dx.doi.org/10.1093/bioinformatics/btt631 CrossRef] | [{{SERVER}}/publications/Jetka-2014-Bioinformatics-MS.pdf PDF-ms] [http://sourceforge.net/p/stochdecomp/ Code-Matlab]
-* <span class="nopmbm">Cheng FHC</span>, <span class="nopmbm">Aguda BD</span>, <span class="nopmbm">Tsai J-C</span>, <span class="pmbm">Kochańczyk M</span>, <span class="nopmbm">Lin JMJ</span>, <span class="nopmbm">Chen GCW</span>, <span class="nopmbm">Lai H-C</span>, <span class="nopmbm">Nephew KP</span>, <span class="nopmbm">Hwang T-W</span>, <span class="nopmbm">Chan MWY</span>. '''A mathematical model of bimodal epigenetic control of miR-193a in ovarian cancer stem cells''', ''PLOS One'' <u>9</u>(12):e116050 (2014) [http://www.ncbi.nlm.nih.gov/pubmed/25545504 PubMed] [http://dx.doi.org/10.1371/journal.pone.0116050 CrossRef] |&nbsp;[http://www.plosone.org/article/fetchObject.action?uri=info%3Adoi%2F10.1371%2Fjournal.pone.0116050&representation=PDF PDF]
-* <span class="nopmbm">Pokrywczyńska M</span>, <span class="nopmbm">Jundziłł A</span>, <span class="nopmbm">Adamowicz J</span>, <span class="nopmbm">Kowalczyk T</span>, <span class="nopmbm">Warda K</span>, <span class="nopmbm">Rasmus M</span>, <span class="nopmbm">Buchholz Ł</span>, <span class="nopmbm">Krzyżanowska S</span>, <span class="pmbm">Nakielski P</span>, <span class="nopmbm">Chmielewski T</span>, <span class="nopmbm">Bodnar M</span>, <span class="nopmbm">Marszałek A</span>, <span class="nopmbm">Dębski R</span>, <span class="nopmbm">Frontczak-Baniewicz M</span>, <span class="nopmbm">Mikułowski G</span>, <span class="nopmbm">Nowacki M</span>, <span class="pmbm">Kowalewski TA</span>, <span class="nopmbm">Drewa T</span>. '''Is the poly(L-lactide-<i>co</i>-caprolactone) nanofibrous membrane suitable for urinary bladder regeneration?''' ''PLOS One'' <u>9</u>(8):105295 (2014) [http://www.ncbi.nlm.nih.gov/pubmed/25162451 PubMed] [http://dx.doi.org/10.1371/journal.pone.0105295 CrossRef] | [{{SERVER}}/publications/Pokrywczynska-2014-PLOSOne.pdf PDF]
-* <span class="nopmbm">Kloskowski T</span>, <span class="nopmbm">Jundziłł A</span>, <span class="nopmbm">Kowalczyk T</span>, <span class="nopmbm">Nowacki M</span>, <span class="nopmbm">Bodnar M</span>, <span class="nopmbm">Marszałek A</span>, <span class="nopmbm">Pokrywczyńska M</span>, <span class="nopmbm">Frontczak-Baniewicz M</span>, <span class="pmbm">Kowalewski TA</span>, <span class="nopmbm">Chłosta P</span>, <span class="nopmbm">Drewa T</span>. '''Ureter regeneration—the proper scaffold has to be defined''', ''PLOS One'' <u>9</u>(8):106023 (2014) [http://www.ncbi.nlm.nih.gov/pubmed/25162415 PubMed] [http://dx.doi.org/10.1371/journal.pone.0106023 CrossRef] | [{{SERVER}}/publications/Kloskowski-2014-PLOSOne.pdf PDF]
-* <span class="nopmbm">Gomez-Sanchez C</span>, <span class="nopmbm">Kowalczyk T</span>, <span class="nopmbm">Ruiz De Eguino G</span>, <span class="nopmbm">Lopez-Arraiza A</span>, <span class="nopmbm">Infante A</span>, <span class="nopmbm">Rodriguez CI</span>, <span class="pmbm">Kowalewski TA</span>, <span class="nopmbm">Sarrionandia M</span>, <span class="nopmbm">Aurrekoetxea J</span>. '''Electrospinning of poly(lactic acid)/polyhedral oligomeric silsesquioxane nanocomposites and their potential in chondrogenic tissue regeneration''', ''J&nbsp;Biomater Sci–Polym Ed'' <u>25</u>(8):802–825 (2014) [http://www.ncbi.nlm.nih.gov/pubmed/24754323 PubMed] [http://dx.doi.org/10.1080/09205063.2014.910151 CrossRef]
-* <span class="nopmbm">Rafalowska J</span>, <span class="nopmbm">Sulejczak D</span>, <span class="nopmbm">Chrapusta SJ</span>, <span class="nopmbm">Gadamski R</span>, <span class="nopmbm">Taraszewska A</span>, <span class="pmbm">Nakielski P</span>, <span class="nopmbm">Kowalczyk T</span>, <span class="nopmbm">Dziewulska D</span>. '''Non-woven nanofiber mats – a new perspective for experimental studies of the central nervous system?''' ''Folia Neuropathol'' <u>52</u>(4): 407-416 (2014) [https://www.ncbi.nlm.nih.gov/pubmed/25574745 PubMed] [http://dx.doi.org/10.5114/fn.2014.47841 CrossRef] |&nbsp;[{{SERVER}}/publications/Rafalowska-2014-FoliaNeuropathol.pdf PDF]
-* <span class="nopmbm">Sulejczak D</span>, <span class="nopmbm">Andrychowski J</span>, <span class="nopmbm">Kowalczyk T</span>, <span class="pmbm">Nakielski P</span>, <span class="nopmbm">Frontczak-Baniewicz M</span>, <span class="pmbm">Kowalewski&nbsp;TA</span>. '''Electrospun nanofiber mat as a protector against the consequences of brain injury''',  ''Folia Neuropathol'' <u>52</u>(1):56–69 (2014) [http://www.ncbi.nlm.nih.gov/pubmed/24729343 PubMed] [http://dx.doi.org/10.5114/fn.2014.41744 CrossRef] | [{{SERVER}}/publications/Sulejczak-2014-FoliaNeuropathol.pdf PDF]
-* <span class="nopmbm">Stasiek J</span>, <span class="nopmbm">Jewartowski M</span>, <span class="pmbm">Kowalewski TA</span>. '''The use of liquid crystal thermography in selected technical and medical applications—Recent development''', ''J&nbsp;Crystalliz Process Technol'' <u>4</u>(1):42466 (2014) [http://dx.doi.org/10.4236/jcpt.2014.41007 CrossRef] | [http://www.scirp.org/journal/PaperDownload.aspx?paperID=42466 PDF]
-* <span class="nopmbm">Blim A</span>, <span class="nopmbm">Jarecki L</span>, <span class="pmbm">Błoński S</span>. '''Modeling of pneumatic melt drawing of polypropylene super-thin fibers in the Laval nozzle''', ''Bull&nbsp;Pol Acad Sci&ndash;Tech Sci'' <u>62</u>(1):43–54 (2014) [http://dx.doi.org/10.2478/bpasts-2014-0005 CrossRef] | [{{SERVER}}/publications/Blim-2014-BullPolAcadSciTechSci.pdf PDF]
-* <span class="pmbm">Korwek Z</span>, <span class="nopmbm">Alster O</span>. Rola szlaku indukowanego uszkodzeniami DNA w apoptozie i starzeniu komórkowym '''[The role of the DNA damage response in apoptosis and cell senescence]''', ''Postepy Biochem'' <u>60</u>(2):248-62 (2014) [http://www.ncbi.nlm.nih.gov/pubmed/25134360 PubMed] | [{{SERVER}}/publications/Korwek-2014-PostepyBiochem.pdf PDF]
-* <span class="nopmbm">Alster O</span>, <span class="pmbm">Korwek Z</span>. Znaczniki starzenia komórkowego '''[Markers of cellular senescence]''', ''Postepy Biochem'' <u>60</u>(2):138-46 (2014) [http://www.ncbi.nlm.nih.gov/pubmed/25134350 PubMed] | [{{SERVER}}/publications/Alster-2014-PostepyBiochem.pdf PDF]
-===2013===
-* <span class="pmbm">Pękalski J</span>, <span class="pmbm">Zuk PJ</span>, <span class="pmbm">Kochańczyk M</span>, <span class="nopmbm">Junkin M</span>, <span class="nopmbm">Kellog R</span>, <span class="nopmbm">Tay S</span>, <span class="pmbm">Lipniacki T</span>. '''Spontaneous NF-κB activation by autocrine TNFα signaling: A&nbsp;computational analysis''', ''PLOS One'' <u>8</u>(11):e78887 (2013) [http://www.ncbi.nlm.nih.gov/pubmed/24324544 PubMed] [http://dx.doi.org/10.1371/journal.pone.0078887 CrossRef] | [http://www.plosone.org/article/fetchObject.action?uri=info%3Adoi%2F10.1371%2Fjournal.pone.0078887&representation=PDF PDF] [{{SERVER}}/publications/supplementary/Pekalski-2013-PLOSOne-SuppText-S1.pdf Supp-PDF] [{{SERVER}}/publications/supplementary/Pekalski-2013-PLOSOne-SuppMaterial-S1.zip Code-Matlab] [{{SERVER}}/publications/supplementary/Pekalski-2013-PLOSOne-SuppMaterial-S2.zip Code-BioNetGen] [{{SERVER}}/publications/supplementary/Pekalski-2013-PLOSOne-SuppMaterial-S3.zip Code-MatCont]
-* <span class="pmbm">Bogdał MN</span>, <span class="pmbm">Hat B</span>, <span class="pmbm">Kochańczyk M</span>, <span class="pmbm">Lipniacki T</span>. '''Levels of pro-apoptotic regulator Bad and anti-apoptotic regulator Bcl-xL determine the type of the apoptotic logic gate''', ''BMC Syst Biol'' <u>7</u>:67 (2013) [http://www.ncbi.nlm.nih.gov/pubmed/23883471 PubMed] [http://dx.doi.org/10.1186/1752-0509-7-67 CrossRef] | [http://www.biomedcentral.com/content/pdf/1752-0509-7-67.pdf PDF] [{{SERVER}}/publications/supplementary/Bogdal-2013-BMCSystBiol-SourceCode.zip Code-Matlab]
-* <span class="pmbm">Kochańczyk M</span>, <span class="pmbm">Jaruszewicz J</span>, <span class="pmbm">Lipniacki T</span>. '''Stochastic transitions in a bistable reaction system on the membrane''', ''J&nbsp;R&nbsp;Soc Interface'' <u>10</u>(84):20130151 (2013) [http://www.ncbi.nlm.nih.gov/pubmed/23635492 PubMed] [http://dx.doi.org/10.1098/rsif.2013.0151 CrossRef] | [http://rsif.royalsocietypublishing.org/content/10/84/20130151.full.pdf PDF] [{{SERVER}}/publications/supplementary/Kochanczyk-2013-JRSocInterface-Supp.pdf Supp-PDF] [{{SERVER}}/publications/supplementary/Kochanczyk-2013-JRSocInterface-Movies.zip Supp-movies]
-* <span class="pmbm">Kocieniewski P</span>, <span class="pmbm">Lipniacki T</span>. '''MEK1 and MEK2 differentially control the duration and amplitude of the ERK cascade response''', ''Phys&nbsp;Biol'' <u>10</u>(3):035006 (2013) [http://www.ncbi.nlm.nih.gov/pubmed/23735655 PubMed] [http://dx.doi.org/10.1088/1478-3975/10/3/035006 CrossRef] | [{{SERVER}}/publications/Kocieniewski-2013-PhysBiol-MS.pdf PDF-ms] [{{SERVER}}/publications/supplementary/Kocieniewski-2013-PhysBiol-SourceCode.zip Code-BioNetGen]
-* <span class="pmbm">Jaruszewicz J</span>, <span class="pmbm">Lipniacki T</span>. '''Toggle switch: Noise determines the winning gene''', ''Phys&nbsp;Biol'' <u>10</u>(3):035007 (2013) [http://www.ncbi.nlm.nih.gov/pubmed/23735670 PubMed] [http://dx.doi.org/10.1088/1478-3975/10/3/035007 CrossRef] | [{{SERVER}}/publications/Jaruszewicz-2013-PhysBiol-MS.pdf PDF-ms]
-* <span class="pmbm">Jaruszewicz J</span>, <span class="pmbm">Zuk PJ</span>, <span class="pmbm">Lipniacki T</span>. '''Type of noise defines global attractors in bistable molecular regulatory systems''', ''J&nbsp;Theor Biol'' <u>317</u>:140–151 (2013; e-pub 2012) [http://www.ncbi.nlm.nih.gov/pubmed/23063780 PubMed] [http://dx.doi.org/10.1016/j.jtbi.2012.10.004 CrossRef] | [{{SERVER}}/publications/Jaruszewicz-2013-JTheorBiol-MS.pdf PDF-ms]
-* <span class="nopmbm">Crooks E</span>, <span class="pmbm">Kazmierczak B</span>, <span class="pmbm">Lipniacki T</span>. '''A spatially extended model of kinase-receptor interaction''', ''SIAM&nbsp;J&nbsp;Appl Math'' <u>73</u>(1):374–400 (2013) [http://dx.doi.org/10.1137/110860926 CrossRef]
-* <span class="pmbm">Szopa P</span>, <span class="pmbm">Dyzma M</span>, <span class="pmbm">Kaźmierczak B</span>. '''Membrane associated complexes in calcium dynamics modelling''', ''Phys&nbsp;Biol'' <u>10</u>(3):035004 (2013) [http://www.ncbi.nlm.nih.gov/pubmed/23735591 PubMed] [http://dx.doi.org/10.1088/1478-3975/10/3/035004 CrossRef]
-* <span class="pmbm">Kaźmierczak B</span>, <span class="pmbm">Peradzyński Z</span>. '''Calcium waves with mechano-chemical couplings''', ''Math&nbsp;Biosci Eng'' <u>10</u>(3):743-759 (2013) [http://dx.doi.org/10.3934/mbe.2013.10.743 CrossRef]
-* <span class="pmbm">Piechór K</span>. '''Calcium waves in thin domains of visco-elastic cells''', ''Math&nbsp;Model Nat Phenom'' <u>8</u>(3):206-226 (2013) [http://dx.doi.org/10.1051/mmnp/20138313 CrossRef]
-* <span class="nopmbm">Finkenstädt BF</span>, <span class="nopmbm">Woodcock DJ</span>, <span class="pmbm">Komorowski M</span>, <span class="nopmbm">Harper CV</span>, <span class="nopmbm">Davis JRE</span>, <span class="nopmbm">White MRH</span>, <span class="nopmbm">Rand DA</span>. '''Quantifying intrinsic and extrinsic noise in gene transcription using the linear noise approximation: an application to single cell data''', ''Ann Appl Stat'' <u>7</u>(4):1837-2457 (2013) [http://dx.doi.org/10.1214/13-AOAS669 CrossRef] | [{{SERVER}}/publications/Finkelstaedt-2013-AnnApplStat-MS.pdf PDF-ms]
-* <span class="nopmbm">Liepe J</span>, <span class="nopmbm">Filippi S</span>, <span class="pmbm">Komorowski M</span>, <span class="nopmbm">Stumpf MPH</span>. '''Maximizing the information content of&nbsp;experiments in systems biology''', ''PLOS Comput Biol'' <u>9</u>(1):e1002888 (2013) [http://www.ncbi.nlm.nih.gov/pubmed/23382663 PubMed]&nbsp;[http://dx.doi.org/10.1371/journal.pcbi.1002888 CrossRef] | [{{SERVER}}/publications/Liepe-2013-PLOSComputBiol.pdf PDF]
-* <span class="pmbm">Komorowski M</span>, <span class="nopmbm">Miękisz J</span>, <span class="nopmbm">Stumpf MPH</span>. '''Decomposing noise in biochemical signalling systems highlights the role of protein degradation''', ''Biophys&nbsp;J'' <u>104</u>(8):1783-1798 (2013) [http://www.ncbi.nlm.nih.gov/pubmed/23601325 PubMed] [http://dx.doi.org/doi:10.1016/j.bpj.2013.02.027 CrossRef] | [{{SERVER}}/publications/Komorowski-2013-BiophysJ.pdf PDF]
-* <span class="nopmbm">Woodcock DJ</span>, <span class="nopmbm">Vance KW</span>, <span class="pmbm">Komorowski M</span>, <span class="nopmbm">Koentges G</span>, <span class="nopmbm">Finkenstädt B</span>, <span class="nopmbm">Rand DA</span>. '''A&nbsp;hierarchical model of transcriptional dynamics allows robust estimation of transcription rates in populations of single cells with variable gene copy number''', ''Bioinformatics'' <u>29</u>(12):1519-1525 (2013) [http://www.ncbi.nlm.nih.gov/pubmed/23677939 PubMed] [http://dx.doi.org/10.1093/bioinformatics/btt201 CrossRef] | [{{SERVER}}/publications/Woodcock-2013-Bioinformatics.pdf PDF]
-* <span class="nopmbm">Schumacher J</span>, <span class="nopmbm">Behrends V</span>, <span class="nopmbm">Pan Z</span>, <span class="nopmbm">Brown DR</span>, <span class="nopmbm">Heydenreich F</span>, <span class="nopmbm">Lewis MR</span>, <span class="nopmbm">Bennett MH</span>, <span class="nopmbm">Razzaghi B</span>, <span class="pmbm">Komorowski M</span>, <span class="nopmbm">Barahona M</span>, <span class="nopmbm">Stumpf MPH</span>, <span class="nopmbm">Wigneshweraraj S</span>, <span class="nopmbm">Bundy JG</span>, <span class="nopmbm">Buck M</span>. '''Nitrogen and carbon status are integrated at the transcriptional level by the nitrogen regulator NtrC <i>in vivo</i>''', ''mBio'' <u>4</u>(6):e00881-13 (2013) [http://www.ncbi.nlm.nih.gov/pubmed/24255125 PubMed] [http://dx.doi.org/10.1128/mBio.00881-13 CrossRef] | [{{SERVER}}/publications/Schumacher-2013-mBio.pdf PDF]
-* <span class="nopmbm">Paprocki B</span>, <span class="pmbm">Szczepanski J</span>. '''Transmission efficiency in ring, brain inspired neuronal networks. Information and energetic aspects''', ''Brain Res'' <u>1536</u>:135–143 (2013) [http://www.ncbi.nlm.nih.gov/pubmed/23891793 PubMed] [http://dx.doi.org/10.1016/j.brainres.2013.07.024 CrossRef]
-* <span class="nopmbm">Paprocki B</span>, <span class="pmbm">Szczepanski J</span>, <span class="pmbm">Kolbuk D</span>. '''Information transmission efficiency in neuronal communication systems''', ''BMC Neuroscience'' (2013) <u>14</u>(Suppl 1):P217 <span style="display:none">[http://dx.doi.org/10.1186/1471-2202-14-S1-P217 CrossRef] | </span>[http://www.biomedcentral.com/content/pdf/1471-2202-14-S1-P217.pdf PDF]
-* <span class="nopmbm">Paprocki B</span>, <span class="pmbm">Szczepanski J</span>. '''How do the amplitude fluctuations affect the neuronal transmission efficiency''', ''Neurocomputing'' <u>104</u>:50-56 (2013; e-pub 2012) [http://dx.doi.org/10.1016/j.neucom.2012.11.001 CrossRef]
-* <span class="nopmbm">Arnold MM</span>, <span class="pmbm">Szczepanski J</span>, <span class="nopmbm">Montejo N</span>, <span class="nopmbm">Amigo JM</span>, <span class="nopmbm">Wajnryb E</span>, <span class="nopmbm">Sanchez-Vives MV</span>. '''Information content in cortical spike trains during brain state transitions''', ''J&nbsp;Sleep Res'' <u>22</u>(1):13-21 (2013, e-pub 2012) [http://www.ncbi.nlm.nih.gov/pubmed/22737985 PubMed] [http://dx.doi.org/10.1111/j.1365-2869.2012.01031.x CrossRef]
-* <span class="pmbm">Chmielowiec A</span>. '''Parallel Algorithm for Multiplying Integer Polynomials and Integers''', ''Lecture Notes in Electrical Engineering'' <u>229</u>:605-616  (2013) [http://dx.doi.org/10.1007/978-94-007-6190-2_46 CrossRef]
-* <span class="nopmbm">Guzowski J</span>, <span class="nopmbm">Jakiela S</span>,  <span class="pmbm">Korczyk PM</span>, <span class="nopmbm">Garstecki P</span>. '''Custom tailoring multiple droplets one-by-one''', ''Lab&nbsp;Chip'' <u>13</u>:4308–4311 (2013) [http://www.ncbi.nlm.nih.gov/pubmed/24064861 PubMed] [http://dx.doi.org/10.1039/C3LC50841B CrossRef]
-* <span class="pmbm">Korczyk PM</span>, <span class="nopmbm">Derzsi L</span>, <span class="nopmbm">Jakiela S</span>, <span class="nopmbm">Garstecki P</span>. '''Microfluidic traps for hard-wired operations on droplets''', ''Lab&nbsp;Chip'' <u>13</u>:4096-4102 (2013) [http://www.ncbi.nlm.nih.gov/pubmed/23970204 PubMed] [http://dx.doi.org/10.1039/C3LC50347J CrossRef]
-*  <span class="nopmbm">Churski K</span>, <span class="nopmbm">Nowacki M</span>, <span class="pmbm">Korczyk PM</span>, <span class="nopmbm">Garstecki P</span>. '''Simple modular systems for generation of droplets on demand''', ''Lab&nbsp;Chip'' <u>13</u>:3689-3697 (2013) [http://www.ncbi.nlm.nih.gov/pubmed/23868204 PubMed] [http://dx.doi.org/10.1039/C3LC50340B CrossRef]
-* <span class="nopmbm">van Steijn V</span>, <span class="pmbm">Korczyk PM</span>, <span class="nopmbm"> Derzsi L, Abate AR, Weitz DA </span>, <span class="nopmbm">Garstecki P</span>. '''Block-and-break generation of microdroplets with fixed volume''', '' Biomicrofluidics'' <u>7</u>(2):024108 (2013) [http://www.ncbi.nlm.nih.gov/pubmed/24404013 PubMed] [http://dx.doi.org/10.1063/1.4801637 CrossRef]
-* <span class="nopmbm">Węgrzyn J</span>, <span class="nopmbm">Samborski A</span>, <span class="nopmbm">Reissig L</span>, <span class="pmbm">Korczyk PM</span>, <span class="pmbm">Błoński S</span>, <span class="nopmbm">Garstecki P</span>. '''Microfluidic architectures for efficient generation of chemistry gradations in droplets''', ''Microfluid&nbsp;Nanofluid'' <u>14</u>(1-2):235–245 (2013, e-pub 2012) [http://dx.doi.org/10.1007/s10404-012-1042-3 CrossRef] | [{{SERVER}}/publications/Wegrzyn-2013-MicrofluidNanofluid.pdf PDF]
-* <span class="nopmbm">Andrychowski J</span>, <span class="nopmbm">Frontczak-Baniewicz M</span>, <span class="nopmbm">Sulejczak D</span>, <span class="pmbm">Kowalczyk T</span>, <span class="pmbm">Chmielewski T</span>, <span class="nopmbm">Czernicki Z</span>, <span class="pmbm">Kowalewski TA</span>. '''Nanofiber nets in prevention of cicatrisation in spinal procedures. Experimental study''', ''Folia Neuropathol'' <u>51</u>(2):147-57 (2013) [http://www.ncbi.nlm.nih.gov/pubmed/23821387 PubMed] [http://dx.doi.org/10.5114/fn.2013.35958 CrossRef]
-* <span class="nopmbm">Kloskowski T</span>, <span class="pmbm">Kowalczyk T</span>, <span class="nopmbm">Nowacki M</span>, <span class="nopmbm">Drewa T</span>. '''Tissue engineering and ureter regeneration, is it possible?''' ''Int&nbsp;J&nbsp;Artif&nbsp;Organs'' <u>36</u>(6):392-405 (2013) [http://www.ncbi.nlm.nih.gov/pubmed/23645581 PubMed] [http://dx.doi.org/10.5301/ijao.5000130 CrossRef]
-===2012===
-* <span class="pmbm">Zuk PJ</span>, <span class="pmbm">Kochańczyk M</span>, <span class="pmbm">Jaruszewicz J</span>, <span class="nopmbm">Bednorz W</span>, <span class="pmbm">Lipniacki T</span>. '''Dynamics of a stochastic spatially extended system predicted by comparing deterministic and stochastic attractors of the corresponding birth-death process''', ''Phys&nbsp;Biol'' <u>9</u>(5):055002 (2012) [http://www.ncbi.nlm.nih.gov/pubmed/23011381 PubMed] [http://dx.doi.org/10.1088/1478-3975/9/5/055002 CrossRef] | [{{SERVER}}/publications/Zuk-2012-PhysBiol-MS.pdf PDF-ms]
-* <span class="pmbm">Kocieniewski P</span>, <span class="nopmbm">Faeder JR</span>, <span class="pmbm">Lipniacki T</span>. '''The interplay of double phosphorylation and scaffolding in MAPK pathways''', ''J&nbsp;Theor&nbsp;Biol'' <u>295</u>:116-124 (2012; e-pub 2011) [http://www.ncbi.nlm.nih.gov/pubmed/22123371 PubMed] [http://dx.doi.org/10.1016/j.jtbi.2011.11.014 CrossRef] | [http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3417091/pdf/nihms341500.pdf PDF-ms]
-* <span class="nopmbm">Barua D</span>, <span class="nopmbm">Hlavacek WS</span>, <span class="pmbm">Lipniacki T</span>. '''A computational model for early events in B&nbsp;cell antigen receptor signaling: analysis of the roles of Lyn and Fyn''', ''J&nbsp;Immunol'' <u>189</u>(2):646-658 (2012) [http://www.ncbi.nlm.nih.gov/pubmed/22711887 PubMed] [http://dx.doi.org/10.4049/jimmunol.1102003 CrossRef] | [http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3392547/pdf/nihms-378694.pdf PDF-ms]
-* <span class="nopmbm">El Khatib N</span>, <span class="nopmbm">Genieys S</span>, <span class="pmbm">Kazmierczak B</span>, <span class="nopmbm">Volpert V</span>. '''Reaction-diffusion model of artherosclerosis development''', ''J&nbsp;Math&nbsp;Biol'' <u>65</u>(2):349-374 (2012) [http://www.ncbi.nlm.nih.gov/pubmed/21858687 PubMed] [http://dx.doi.org/10.1007/s00285-011-0461-1 CrossRef]
-* <span class="nopmbm">Gejji R</span>, <span class="pmbm">Kaźmierczak B</span>, <span class="nopmbm">Alber M</span>. '''Classification and stability of global inhomogeneous solutions of a macroscopic model of cell motion''', ''Math&nbsp;Biosci'' <u>238</u>(1):21-31 (2012) [http://www.ncbi.nlm.nih.gov/pubmed/22504124 PubMed] [http://dx.doi.org/10.1016/j.mbs.2012.03.009 CrossRef]
-* <span class="pmbm">Dyzma M</span>, <span class="pmbm">Szopa P</span>, <span class="pmbm">Kaźmierczak B</span>. '''Membrane associated complexes: new approach to calcium dynamics modeling''', ''Math&nbsp;Model Nat Phenom'' <u>7</u>(2):32-50 (2012) [http://dx.doi.org/10.1051/mmnp/20127608 CrossRef]
-* <span class="pmbm">Piechór K</span>. '''Reaction-diffusion equation modelling calcium waves with fast buffering in visco-elastic environment''', ''Arch&nbsp;Mech'' <u>64</u>(5):477-509 (2012) [{{SERVER}}/publications/Piechor-2012-ArchMech.pdf PDF]
-* <span class="pmbm">Korczyk PM</span>, <span class="pmbm">Kowalewski TA</span>, <span class="nopmbm">Malinowski SP</span>. '''Turbulent mixing of clouds with the environment: Small scale two phase evaporating flow investigated in a laboratory by particle image velocimetry''', ''Physica&nbsp;D'' 241:288-296 (2012) [http://dx.doi.org/10.1016/j.physd.2011.11.003 CrossRef]
-* <span class="nopmbm">Guzowski J</span>, <span class="pmbm">Korczyk PM</span>, <span class="nopmbm">Jakiela S</span>, <span class="nopmbm">Garstecki P</span>. '''The structure and stability of multiple micro-droplets''', ''Soft Matter'' <u>8</u>:7269-7278 (2011) [http://dx.doi.org/10.1039/C2SM25838B CrossRef]
-* <span class="nopmbm">Jakiela S</span>, <span class="pmbm">Korczyk PM</span>, <span class="nopmbm">Makulska S</span>, <span class="nopmbm">Cybulski O</span>, <span class="nopmbm">Garstecki P</span>. '''Discontinuous transition in a laminar fluid flow: A change of flow topolgy inside a droplet moving in a micron-size channel''', ''Phys&nbsp;Rev&nbsp;Lett'' <u>108</u>(13):134501 (2012) [http://www.ncbi.nlm.nih.gov/pubmed/22540703 PubMed] [http://dx.doi.org/10.1103/PhysRevLett.108.134501 CrossRef]
-* <span class="nopmbm">Sikora M</span>, <span class="nopmbm">Adam D</span>, <span class="pmbm">Korczyk PM</span>, <span class="nopmbm">Prodi-Schwab A</span>, <span class="nopmbm">Szymczak P</span>, <span class="nopmbm">Cieplak M</span>. '''Geometrical and electrical properties of indium tin oxide clusters in ink dispersions''', ''Langmuir'' <u>28</u>(2):1523-1530 (2012) [http://www.ncbi.nlm.nih.gov/pubmed/22136161 PubMed] [http://dx.doi.org/10.1021/la203886b CrossRef]
-* <span class="nopmbm">Baranowska-Korczyc A</span>, <span class="nopmbm">Reszka A</span>, <span class="nopmbm">Sobczak K</span>, <span class="nopmbm">Sikora B</span>, <span class="nopmbm">Dziawa P</span>, <span class="nopmbm">Aleszkiewicz M</span>, <span class="nopmbm">Kłopotowski Ł,</span> <span class="nopmbm">Paszkowicz W</span>, <span class="nopmbm">Dłużewski P</span>, <span class="nopmbm">Kowalski BJ</span>, <span class="pmbm">Kowalewski TA</span>, <span class="nopmbm">Sawicki M</span>, <span class="nopmbm">Elbaum D</span>, <span class="nopmbm">Fronc K</span>, '''Magnetic Fe doped ZnO nanofibers obtained by electrospinning''', ''J&nbsp;Sol-Gel Sci Techn'' <u>61</u>(3):494-500 (2012) [http://dx.doi.org/10.1007/s10971-011-2650-1 CrossRef]
-* <span class="nopmbm">Jarecki L</span>, <span class="pmbm">Błoński S</span>, <span class="nopmbm">Blim A</span>, <span class="nopmbm">Zachara A</span>. '''Modeling of Pneumatic Melt Spinning Processes''', ''J&nbsp;Appl&nbsp;Polym&nbsp;Sci'' <u>125</u>(6):4402–4415 (2012) [http://dx.doi.org/10.1002/app.36575 CrossRef]
-* <span class="nopmbm">Kołbuk D</span>, <span class="nopmbm">Sajkiewicz P</span>, <span class="pmbm">Kowalewski TA</span>, '''Optical birefringence and molecular orientation of electrospun polycaprolactone fibers by polarizing-interference microscopy''', ''Eur&nbsp;Polym&nbsp;J'' <u>48</u>:275-283 (2012) [http://dx.doi.org/10.1016/j.eurpolymj.2011.11.012 CrossRef]
-* <span class="nopmbm">Blim A</span>, <span class="pmbm">Kowalczyk T</span>. '''Dynamic lattice liquid (DLL) model in computer simulation of the structure and dynamics of polymer condensed systems''', ''e-Polymers'' <u>079</u>:1-11 (2012) [{{SERVER}}/publications/Blim-2012-ePolymers.pdf PDF]
-===2011===
-* <span class="pmbm">Hat B</span>, <span class="pmbm">Kaźmierczak B</span>, <span class="pmbm">Lipniacki T</span>. '''B cell activation triggered by the formation of the small receptor cluster: A computational study''', ''PLoS&nbsp;Comput&nbsp;Biol'' <u>7</u>(10):e1000448 (2011) [http://www.ncbi.nlm.nih.gov/pubmed/21998572 PubMed] [http://dx.doi.org/10.1371/journal.pcbi.1002197 CrossRef] | [{{SERVER}}/publications/Hat-2011-PLoSComputBiol.pdf PDF]
-* <span class="pmbm">Szopa P</span>, <span class="pmbm">Lipniacki T</span>, <span class="pmbm">Kaźmierczak B</span>. '''Exact solutions to a spatially extended model of kinase-receptor interaction''', ''Phys&nbsp;Biol'' <u>8</u>(5):055005 (2011) [http://www.ncbi.nlm.nih.gov/pubmed/21832804 PubMed] [http://dx.doi.org/10.1088/1478-3975/8/5/055005 CrossRef]
-* <span class="pmbm">Kaźmierczak B</span>, <span class="pmbm">Peradzyński Z</span>. '''Calcium waves with fast buffers and mechanical effects''', ''J&nbsp;Math&nbsp;Biol'' <u>62</u>:1-38 (2011, e-pub 2010) [http://www.ncbi.nlm.nih.gov/pubmed/20098991 PubMed] [http://dx.doi.org/10.1007/s00285-009-0323-2 CrossRef]
-* <span class="pmbm">Kaźmierczak B</span>, <span class="pmbm">Piechór K</span>. '''Traveling wave solutions of a model of skin pattern formation in a singular case''', ''Math&nbsp;Method Appl&nbsp;Sci'' <u>34</u>(3):325–337 (2011; e-pub 2010) [http://dx.doi.org/10.1002/mma.1359 CrossRef]
-* <span class="pmbm">Kochańczyk M</span>. '''Prediction of functionally important residues in globular proteins from unusual central distances of amino acids''', ''BMC&nbsp;Struct&nbsp;Biol'' <u>11</u>(1):34 (2011) [http://www.ncbi.nlm.nih.gov/pubmed/21923943 PubMed] [http://dx.doi.org/10.1186/1472-6807-11-34 CrossRef] | [http://www.biomedcentral.com/content/pdf/1472-6807-11-34.pdf PDF] [{{SERVER}}/publications/Kochanczyk-2011-BMCStructBiol.pdf PDF+supp] [{{SERVER}}/publications/supplementary/Kochanczyk-2011-BMCStructBiol-SourceCode.tar.gz Code] [{{SERVER}}/services/surpresi/ Server]
-* <span class="nopmbm">Guzowski J</span>, <span class="pmbm">Korczyk PM</span>, <span class="nopmbm">Jakiela S</span>, <span class="nopmbm">Garstecki P</span>. '''Automated high-throughtput generation of droplets''', ''Lab&nbsp;Chip'' <u>11</u>:3593–3595 (2011) [http://www.ncbi.nlm.nih.gov/pubmed/21927762 PubMed] [http://dx.doi.org/10.1039/C1LC20595A CrossRef]
-* <span class="nopmbm">Jakiela S</span>, <span class="nopmbm">Makulska S</span>, <span class="pmbm">Korczyk PM</span>, <span class="nopmbm">Garstecki P</span>. '''Speed of flow of individual droplets in microfluidic channels as a function of the capillary number, volume of droplets and contrast of viscosities''', ''Lab&nbsp;Chip'' <u>11</u>(21):3603–3608 (2011) [http://www.ncbi.nlm.nih.gov/pubmed/21909516 PubMed] [http://dx.doi.org/10.1039/C1LC20534J CrossRef]
-* <span class="nopmbm">Sielamowicz I</span>, <span class="nopmbm">Czech M</span>, <span class="pmbm">Kowalewski TA</span>. '''Empirical analysis of eccentric flow registered by the DPIV technique inside a silo model''', ''Powder&nbsp;Technol'' <u>212</u>:38–56 (2011) [http://dx.doi.org/10.1016/j.powtec.2011.04.022 CrossRef]
-* <span class="nopmbm">Sielamowicz I</span>, <span class="nopmbm">Czech M</span>, <span class="pmbm">Kowalewski TA</span>. '''Empirical description of granular flow inside a model silo with vertical walls''', ''Biosyst&nbsp;Eng'' <u>108</u>(4):334–344 (2011) [http://dx.doi.org/10.1016/j.biosystemseng.2011.01.004 CrossRef]
-* <span class="pmbm">Szczepański J</span>, <span class="nopmbm">Arnold M</span>, <span class="nopmbm">Wajnryb E</span>, <span class="nopmbm">Amigó JM</span>, <span class="nopmbm">Sanchez-Vives MV</span>. '''Mutual information and redundancy in spontaneous communication between cortical neurons''', ''Biol&nbsp;Cybern'' <u>104</u>:161–174 (2011) [http://www.ncbi.nlm.nih.gov/pubmed/21340601 PubMed] [http://dx.doi.org/10.1007/s00422-011-0425-y CrossRef]
-* <span class="nopmbm">Paprocki B</span>, <span class="pmbm">Szczepański J</span>. '''Efficiency of neural transmission as a function of synaptic noise, threshold, and source characteristics''', ''Biosystems'' <u>105</u>(1):62–72 (2011) [http://www.ncbi.nlm.nih.gov/pubmed/21439348 PubMed] [http://dx.doi.org/10.1016/j.biosystems.2011.03.005 CrossRef]
-* <span class="nopmbm">Kursa M</span>, <span class="nopmbm">Bajer K</span>, <span class="pmbm">Lipniacki T</span>. '''Cascade of vortex loops initiated by a single reconnection of quantum vortices''', ''Phys&nbsp;Rev&nbsp;B'' <u>83</u>(1):014515 (2011) [http://dx.doi.org/10.1103/PhysRevB.83.014515 CrossRef] | [{{SERVER}}/publications/Kursa-2011-PhysRevB-MS.pdf PDF-ms]
-* <span class="nopmbm">Chylek LA</span>, <span class="nopmbm">Hu B</span>, <span class="nopmbm">Blinov ML</span>, <span class="nopmbm">Emonet T</span>, <span class="nopmbm">Faeder JR</span>, <span class="nopmbm">Goldstein B</span>, <span class="nopmbm">Gutenkunst RN</span>, <span class="nopmbm">Haugh JM</span>, <span class="pmbm">Lipniacki T</span>, <span class="nopmbm">Posner RG</span>, <span class="nopmbm">Yang J</span>, <span class="nopmbm">Hlavacek WS</span>. '''Guidelines for visualizing and annotating rule-based models''', ''Mol&nbsp;Biosyst'' <u>7</u>(10):2779-95 (2011) [http://www.ncbi.nlm.nih.gov/pubmed/21647530 PubMed] [http://dx.doi.org/10.1039/c1mb05077J CrossRef] | [http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3168731/pdf/nihms-301574.pdf PDF-ms]
-* <span class="pmbm">Błoński S</span>, <span class="nopmbm">Domagalski P</span>, <span class="nopmbm">Dziubiński M</span>, <span class="pmbm">Kowalewski TA</span>. '''Hydrodynamically modified seeding for micro-PIV''', ''Arch&nbsp;Mech'' <u>63</u>:163–182 (2011) [{{SERVER}}/publications/Blonski-2011-ArchMech.pdf PDF]
-* <span class="nopmbm">Jarecki L</span>, <span class="pmbm">Błoński S</span>, <span class="nopmbm">Zachara A</span>, <span class="nopmbm">Blim A</span>. '''Computer modeling of pneumatic formation of superthin fibres''', ''Comp&nbsp;Meth Mat Sci'' <u>11</u>(1): 74–80 (2011)
-* <span class="nopmbm">Szumbarski J</span>, <span class="pmbm">Błoński S</span>. '''Destabilization of laminar flow in a rectangular channel by transversely-oriented wall corrugation''', ''Arch&nbsp;Mech'' <u>63</u>(4):393–428 (2011) [{{SERVER}}/publications/Szumbarski-2011-ArchMech.pdf PDF]
-* <span class="nopmbm">Szymborski T</span>, <span class="pmbm">Korczyk PM</span>, <span class="nopmbm">Hołyst R</span>, <span class="nopmbm">Garstecki P</span>. '''Ionic polarization of liquid-liquid interfaces; dynamic control of the rate of electro-coalescence''', ''Appl&nbsp;Phys&nbsp;Lett'' <u>99</u>:094101 (2011) [http://dx.doi.org/10.1063/1.3629783 CrossRef]
-* <span class="pmbm">Korczyk PM</span>, <span class="nopmbm">Cybulski O</span>, <span class="nopmbm">Makulska S</span>, <span class="nopmbm">Garstecki P</span>. '''Effects of unsteadiness of the rates of flow on the dynamics of formation of droplets in microfluidic systems''', ''Lab&nbsp;Chip'' <u>11</u>:173–175 (2011) [http://www.ncbi.nlm.nih.gov/pubmed/20949204 PubMed] [http://dx.doi.org/10.1039/C0LC00088D CrossRef]
-===2010===
-* <span class="nopmbm">Tay S</span>, <span class="nopmbm">Hughey J</span>, <span class="nopmbm">Lee T</span>, <span class="pmbm">Lipniacki T</span>, <span class="nopmbm">Covert M</span>, <span class="nopmbm">Quake S</span>. '''Single-cell NF-&kappa;B dynamics reveal digital activation and analogue information processing''', ''Nature'' <u>466</u>:267-271 (2010) [http://www.ncbi.nlm.nih.gov/pubmed/20581820 PubMed] [http://dx.doi.org/10.1038/nature09145 CrossRef] | [{{SERVER}}/publications/Tay-2010-Nature.pdf PDF] [{{SERVER}}/publications/supplementary/Tay-2010-Nature-SourceCode.zip Code]
-* <span class="pmbm">Kaźmierczak B</span>, <span class="pmbm">Dyzma M</span>. '''Mechanical effects coupled with calcium waves''', ''Arch&nbsp;Mech'' <u>62</u>:121-133 (2010). [{{SERVER}}/publications/Kazmierczak-2010-ArchMech.pdf PDF]
-* <span class="pmbm">Kaźmierczak B</span>, <span class="pmbm">Lipniacki T</span>. '''Spatial gradients in kinase cascade regulation''', ''IET&nbsp;Syst&nbsp;Biol'' <u>4</u>:348-355 (2010) [http://www.ncbi.nlm.nih.gov/pubmed/21073234 PubMed] [http://dx.doi.org/10.1049/iet-syb.2010.0002 CrossRef] | [{{SERVER}}/publications/Kazmierczak-2010-IETSystBiol-MS.pdf PDF-ms]
-* <span class="pmbm">Peradzyński Z</span>. '''Diffusion of calcium in biological tissues and accompanying mechano-chemical effects''', ''Arch&nbsp;Mech'' <u>62</u>(6):423-440 (2010) [{{SERVER}}/publications/Peradzynski-2010-ArchMech.pdf PDF]
-* <span class="nopmbm">Sadlej K</span>, <span class="nopmbm">Wajnryb E</span>, <span class="nopmbm">Ekiel-Jeżewska ML</span>, <span class="pmbm">Lamparska D</span>, <span class="pmbm">Kowalewski TA</span>. '''Dynamics of nanofibres conveyed by low Reynolds number flow in a microchannel''', ''Int&nbsp;J&nbsp;Heat&nbsp;Fluid&nbsp;Fl'' <u>31</u>:996-1004 (2010) [http://dx.doi.org/10.1016/j.ijheatfluidflow.2010.02.021 CrossRef]
-* <span class="nopmbm">Sielamowicz I</span>, <span class="nopmbm">Czech M</span>, <span class="pmbm">Kowalewski TA</span>. '''Empirical description of flow parameters in eccentric flow inside a silo model''', ''Powder&nbsp;Technol'' <u>198</u>:381-394 (2010) [http://dx.doi.org/10.1016/j.powtec.2009.12.003 CrossRef]
-* <span class="pmbm">Piechór K</span>. '''Forms of travelling waves admitted by a mechanochemical model of tumour angiogenesis''', ''Math&nbsp;Method&nbsp;Appl&nbsp;Sci'' <u>33</u>:1482-1495 (2010) [http://dx.doi.org/10.1002/mma.1262 CrossRef]
-*  <span class="nopmbm">Churski K</span>, <span class="pmbm">Korczyk P</span>, <span class="nopmbm">Garstecki P</span>. '''High-throughput automated droplet microfluidic system for screening of reaction conditions''', ''Lab&nbsp;Chip'' <u>10</u>:816 (2010) [http://www.ncbi.nlm.nih.gov/pubmed/20300668 PubMed] [http://dx.doi.org/10.1039/B925500A CrossRef]
-===2009===
-* <span class="pmbm">Szczepański J</span>. '''On the distribution function of the complexity of finite sequences''', ''Inform&nbsp;Sciences'' <u>179</u>:1217-1220 (2009) [http://dx.doi.org/10.1016/j.ins.2008.12.019 CrossRef]
-* <span class="nopmbm">Alber M</span>, <span class="nopmbm">Gejji R</span>, <span class="pmbm">Kaźmierczak B</span>. '''Existence of global solutions of a macroscopic model of cellular motion in a chemotactic field''', ''Appl&nbsp;Math&nbsp;Lett'' <u>22</u>:1645-1648  (2009) [http://dx.doi.org/10.1016/j.aml.2009.05.013 CrossRef]
-* <span class="pmbm">Hat B</span>, <span class="pmbm">Puszyński K</span>, <span class="pmbm">Lipniacki T</span>. '''Exploring mechanisms of oscillations in p53 and NF-&kappa;B systems''', ''IET&nbsp;Syst&nbsp;Biol'' <u>3</u>(5):342-355 (2009) [http://www.ncbi.nlm.nih.gov/pubmed/21028925 PubMed] [http://dx.doi.org/10.1049/iet-syb.2008.0156 CrossRef] | [{{SERVER}}/publications/Hat-2009-IETSystBiol-MS.pdf PDF-ms]
-* <span class="pmbm">Puszyński K</span>, <span class="nopmbm">Bertolusso R</span>, <span class="pmbm">Lipniacki T</span>. '''Crosstalk between p53 and NF-κB systems: pro- and anti-apoptotic functions of NF-κB''', ''IET&nbsp;Syst&nbsp;Biol'' <u>3</u>(5):356-367 (2009) [http://www.ncbi.nlm.nih.gov/pubmed/21028926 PubMed] [http://dx.doi.org/10.1049/iet-syb.2008.0172 CrossRef] | [{{SERVER}}/publications/Puszynski-2009-IETSystBiol-MS.pdf PDF-ms] [{{SERVER}}/publications/supplementary/Puszynski-2009-IETSystBiol-SourceCode.zip Code]
-* <span class="pmbm">Kaźmierczak B</span>, <span class="pmbm">Lipniacki T.</span> '''Regulation of kinase activity by diffusion and feedback''', ''J&nbsp;Theor&nbsp;Biol'' <u>259</u>:291-296 (2009) [http://www.ncbi.nlm.nih.gov/pubmed/19306885 PubMed] [http://dx.doi.org/10.1016/j.jtbi.2009.03.016 CrossRef]
-* <span class="nopmbm">Alabrudziński S</span>, <span class="nopmbm">Ekiel-Jeżewska ML</span>, <span class="nopmbm">Chehata-Gomez D</span>, <span class="pmbm">Kowalewski TA</span>. '''Particle clusters settling under gravity in a viscous fluid''', ''Phys&nbsp;Fluids'' <u>21</u>:073302 (2009) [http://dx.doi.org/10.1063/1.3168615 CrossRef]
-* <span class="pmbm">Peradzyński Z</span>, <span class="nopmbm">Barral S</span>, <span class="nopmbm">Makowski K</span>, <span class="nopmbm">Dudeck M</span>. '''Causality violation in analysis of Hall thruster plasma instabilities''', ''J&nbsp;Tech&nbsp;Phys'' <u>49</u>(3-4):315-327 (2009)
-* <span class="nopmbm">El Khatib N</span>, <span class="nopmbm">Génieys S</span>, <span class="pmbm">Kaźmierczak B</span>, <span class="nopmbm">Volpert V</span>. '''Mathematical modelling of atherosclerosis as an inflammatory disease''', ''Phil&nbsp;Trans&nbsp;R&nbsp;Soc&nbsp;A'' <u>367</u>(1908):4877-4886 (2009) [http://www.ncbi.nlm.nih.gov/pubmed/19884184 PubMed] [http://dx.doi.org/10.1098/rsta.2009.0142 CrossRef]
-* <span class="nopmbm">Fryczkowski R</span>, <span class="pmbm">Kowalczyk T</span>. '''Nanofibres from polianiline/polihydroxybutyrate blends''', ''Synthetic&nbsp;Met'' <u>159</u>:2266-2268 (2009) [http://dx.doi.org/10.1016/j.synthmet.2009.09.008 CrossRef]
-* <span class="nopmbm">Bretcanu O</span>, <span class="nopmbm">Misra SK</span>, <span class="nopmbm">Yunos DM</span>, <span class="nopmbm">Boccaccini AR</span>, <span class="nopmbm">Roy I</span>, <span class="pmbm">Kowalczyk T</span>, <span class="pmbm">Błoński S</span>, <span class="pmbm">Kowalewski TA</span>. '''Electrospun nanofibrous biodegradable polyester coatings on Bioglass-based glass-ceramics for tissue engineering''', ''Mater&nbsp;Chem&nbsp;Phys'' <u>118</u>:420-426 (2009) [http://dx.doi.org/10.1016/j.matchemphys.2009.08.011 CrossRef]
-===2008===
-* <span class="pmbm">Kaźmierczak B</span>. '''Existence of global solutions to a model of chondrogenesis''', ''Math&nbsp;Meth&nbsp;Appl&nbsp;Sci'' <u>32</u>(3):264-283 (2008) [http://dx.doi.org/10.1002/mma.1034 CrossRef]
-* <span class="pmbm">Kaźmierczak B</span>, <span class="nopmbm">Volpert V</span>. '''Calcium waves in systems with immobile buffers as a limit of waves for systems with non zero diffusion''', ''Nonlinearity'' <u>21</u>:71 (2008) [http://dx.doi.org/10.1088/0951-7715/21/1/004 CrossRef]
-* <span class="pmbm">Kaźmierczak B</span>, <span class="nopmbm">Volpert V</span>. '''Travelling calcium waves in systems with non diffusing buffers''', ''Math&nbsp;Mod&nbsp;Meth&nbsp;Appl&nbsp;Sci'' <u>18</u>(6):883-912 (2008) [http://dx.doi.org/10.1142/S0218202508002899 CrossRef]
-* <span class="pmbm">Puszyński K</span>, <span class="pmbm">Hat B</span>,  <span class="pmbm">Lipniacki T</span>. '''Oscillations and bistability in the stochastic model of p53''', ''J&nbsp;Theor&nbsp;Biol'' <u>254</u>(2):452-465 (2008) [http://www.ncbi.nlm.nih.gov/pubmed/18577387 PubMed] [http://dx.doi.org/10.1016/j.jtbi.2008.05.039 CrossRef] | [{{SERVER}}/publications/supplementary/Puszynski-2008-JTheorBiol-SourceCode.zip Code]
-* <span class="pmbm">Lipniacki T</span>, <span class="pmbm">Hat B</span>, <span class="nopmbm">Faeder JR</span>, <span class="nopmbm">Hlavacek WS</span>. '''Stochastic effects and bistability in T&nbsp;cell receptor signaling''', ''J&nbsp;Theor&nbsp;Biol'' <u>254</u>(1):110-122 (2008) [http://www.ncbi.nlm.nih.gov/pubmed/18556025 PubMed] [http://dx.doi.org/10.1016/j.jtbi.2008.05.001 CrossRef] | [{{SERVER}}/publications/Lipniacki-2008-JTheorBiol-MS.pdf PDF-ms] [{{SERVER}}/publications/supplementary/Lipniacki-2008-JTheorBiol-ODE.zip Code-ODE] [{{SERVER}}/publications/supplementary/Lipniacki-2008-JTheorBiol-Gillespie.zip Code-Gillespie] [{{SERVER}}/publications/supplementary/Lipniacki-2008-JTheorBiol.bngl Code-BioNetGen]
-* <span class="nopmbm">Amigó JM</span>, <span class="nopmbm">Kocarev L</span>, <span class="pmbm">Szczepański J</span>. '''On some properties of the discrete Lyapunov exponent''', ''Phys&nbsp;Lett&nbsp;A'' 372:6265-6268 (2008) [http://dx.doi.org/10.1016/j.physleta.2008.07.076 CrossRef]
-* <span class="nopmbm">Nagarajan R</span>, <span class="pmbm">Szczepański J</span>, <span class="nopmbm">Wajnryb E</span>. '''Interpreting non-random signatures in biomedical signals using Lempel-Ziv complexity''', ''Physica&nbsp;D'' <u>237</u>(3):359-364 (2008) [http://dx.doi.org/10.1016/j.physd.2007.09.007 CrossRef]
-* <span class="pmbm">Kowalewski TA</span>, <span class="pmbm">Błoński S</span>, <span class="pmbm">Korczyk P</span>. Eksperymentalna analiza przepływów w skali mikro i nano '''[Experimental analysis of micro- and nanoscale flows]''', in Wybrane zagadnienia przepływów i wymiany ciepła, Oficyna Wyd. Polit. Warsz. <u>6</u>:127-149 (2008)
-* <span class="nopmbm">Licznar P</span>, <span class="nopmbm">Łomotowski J</span>, <span class="pmbm">Błoński S</span>, <span class="nopmbm">Ciach GJ</span>. '''Microprocessor Field Impactometer Calibration: Do We Measure Drops Momentum or Their Kinetic Energy?''', ''J&nbsp;Atmos&nbsp;Ocean&nbsp;Tech'' <u>25</u>:742-753 (2008) [http://dx.doi.org/10.1175/2007JTECHA938.1 CrossRef]
-* <span class="pmbm">Kowalczyk T</span>, <span class="nopmbm">Nowicka A</span>, <span class="nopmbm">Elbaum D</span>, <span class="pmbm">Kowalewski TA</span>. '''Electrospinning of bovine serum albumin. Optimization and the use for production of biosensors''', ''Biomacromolecules'' <u>9</u>:2087-2090 (2008) [http://www.ncbi.nlm.nih.gov/pubmed/18576601 PubMed] [http://dx.doi.org/10.1021/bm800421s CrossRef]
-* <span class="nopmbm">Piechór K</span>. '''Non-local Korteweg stresses from kinetic theory point of view''', ''Arch&nbsp;Mech'' <u>60</u>(1):23-58 (2008) [{{SERVER}}/publications/Piechor-2008-ArchMech.pdf PDF]
-* <span class="nopmbm">Malinowski SP</span>, <span class="nopmbm">Andrejczuk M</span>, <span class="nopmbm">Grabowski W</span>, <span class="pmbm">Korczyk P</span>, <span class="pmbm">Kowalewski TA</span>, <span class="nopmbm">Smolarkiewicz PK</span>. '''Laboratory and modeling studies of cloud–clear air interfacial mixing: anisotropy of small-scale turbulence due to evaporative cooling''', ''New&nbsp;J&nbsp;Phys'' <u>10</u>:075020 (2008) [http://dx.doi.org/10.1088/1367-2630/10/7/075020 CrossRef]
-===2007===
-* <span class="pmbm">Błoński S</span>, <span class="pmbm">Korczyk PM</span>, <span class="pmbm">Kowalewski TA</span>. '''Analysis of turbulence in a micro-channel emulsifier''', ''Int&nbsp;J&nbsp;Therm&nbsp;Sci'' <u>46</u>:1126–1141 (2007) [http://dx.doi.org/10.1016/j.ijthermalsci.2007.01.028 CrossRef]
-* <span class="pmbm">Lipniacki T</span>, <span class="pmbm">Puszyński K</span>, <span class="nopmbm">Paszek P</span>, <span class="nopmbm">Brasier AR</span>, <span class="nopmbm">Kimmel M</span>. '''Single TNF&alpha; trimers mediating NF-&kappa;B activation: Stochastic robustness of NF-&kappa;B signaling''', ''BMC&nbsp;Bioinformatics'' <u>8</u>:376 (2007) [http://www.ncbi.nlm.nih.gov/pubmed/17925009 PubMed] [http://dx.doi.org/10.1186/1471-2105-8-376 CrossRef] |  [{{SERVER}}/publications/Lipniacki-2007-BMCBioinformatics.pdf PDF] [{{SERVER}}/publications/supplementary/Lipniacki-2007-BMCBioinformatics-Supp1.pdf PDF-supp1] [{{SERVER}}/publications/supplementary/Lipniacki-2007-BMCBioinformatics-Supp2.pdf PDF-supp2] [{{SERVER}}/publications/supplementary/Lipniacki-2007-BMCBioinformatics-Supp3.pdf PDF-supp3] [{{SERVER}}/publications/supplementary/Lipniacki-2007-BMCBioinformatics-SourceCode.zip Code] [{{SERVER}}/publications/supplementary/Lipniacki-2007-BMCBioinformatics-SourceCodeSupp.zip Code-supp]
-* <span class="nopmbm">Alber M</span>, <span class="nopmbm">Glimm T</span>, <span class="nopmbm">Hentschel HG</span>, <span class="pmbm">Kazmierczak B</span>, <span class="nopmbm">Zhang YT</span>, <span class="nopmbm">Zhu J</span>, <span class="nopmbm">Newman SA</span>. '''The&nbsp;morphostatic limit for a model of skeletal pattern formation in the vertebrate limb''', ''Bull&nbsp;Math&nbsp;Biol'' <u>69</u>:460-483 (2007) [http://www.ncbi.nlm.nih.gov/pubmed/17965922 PubMed] [http://dx.doi.org/10.1007/s11538-007-9264-3 CrossRef]
-* <span class="nopmbm">Newman SA</span>, <span class="nopmbm">Christley S</span>, <span class="nopmbm">Glimm T</span>, <span class="nopmbm">Hentschel HG</span>, <span class="pmbm">Kazmierczak B</span>, <span class="nopmbm">Zhang YT</span>, <span class="nopmbm">Zhu J</span>, <span class="nopmbm">Alber&nbsp;M</span>. '''Multiscale models for vertebrate limb development''', ''Curr&nbsp;Top&nbsp;Dev&nbsp;Biol'' <u>81</u>:311-340 (2007) [http://www.ncbi.nlm.nih.gov/pubmed/18023733 PubMed] [http://dx.doi.org/10.1016/S0070-2153(07)81011-8 CrossRef]
-* <span class="nopmbm">Amigo JM</span>, <span class="nopmbm">Kocarev L</span>, <span class="pmbm">Szczepanski J</span>. '''Theory and practice of chaotic cryptography''', ''Phys&nbsp;Lett&nbsp;A'' <u>366</u>:211-216 (2007) [http://dx.doi.org/10.1016/j.physleta.2007.02.021 CrossRef]
-* <span class="pmbm">Lipniacki T</span>, <span class="nopmbm">Kimmel M</span>. '''Deterministic and stochastic models of NF-κB pathway''', ''Cardiovasc Toxicol'' <u>7</u>(4):215-234 (2007) [http://www.ncbi.nlm.nih.gov/pubmed/17943462 PubMed] [http://dx.doi.org/10.1007/s12012-007-9003-x CrossRef]
-* <span class="nopmbm">Bobrowski A</span>, <span class="pmbm">Lipniacki T</span>, <span class="nopmbm">Pichor K</span>, <span class="nopmbm">Rudnicki R</span>. '''Asymptotic behavior of distributions of mRNA and protein levels in a model of stochastic gene expression''', ''J&nbsp;Math Anal&nbsp;Appl'' <u>333</u>:753-769 (2007) [http://dx.doi.org/10.1016/j.jmaa.2006.11.043 CrossRef]
-* <span class="pmbm">Hat B</span>, <span class="nopmbm">Paszek P</span>, <span class="nopmbm">Kimmel M</span>, <span class="nopmbm">Piechor K</span>, <span class="pmbm">Lipniacki T</span>. '''How the number of alleles influences gene expression''', ''J&nbsp;Stat&nbsp;Phys'' <u>128</u>:511-533 (2007) [http://dx.doi.org/10.1007/s10955-006-9218-4 CrossRef]
-* <span class="nopmbm">Fujarewicz K</span>, <span class="nopmbm">Kimmel M</span>, <span class="pmbm">Lipniacki T</span>, <span class="nopmbm">Swierniak A</span>. '''Adjoint systems for models of cell signalling pathways and their application to parameter fitting''', ''IEEE/ACM&nbsp;T&nbsp;Comput Biol Bioinform'' <u>4</u>:322-335 (2007) [http://www.ncbi.nlm.nih.gov/pubmed/17666754 PubMed] [http://doi.ieeecomputersociety.org/10.1109/tcbb.2007.1016 CrossRef]
-* <span class="pmbm">Kowalewski TA</span>. '''Thermochromic Liquid Crystals''', in ''Springer Handbook of Experimental Fluid Mechanics'', chap. B 7.1, 487-499 (2007)
-* <span class="nopmbm">Amigo JM</span>, <span class="nopmbm">Kocarev L</span>, <span class="pmbm">Szczepanski J</span>, '''Discrete Lyapunov exponent and resistance to differential cryptanalysis''', ''IEEE&nbsp;T&nbsp;Circuits II'' <u>54</u>:882-886 (2007) [http://dx.doi.org/10.1109/TCSII.2007.901576 CrossRef]
-* <span class="pmbm">Kazmierczak B</span>, <span class="nopmbm">Volpert V</span>. '''Travelling waves in partially degenerated reaction-diffusion systems''', ''Mathematical Modelling of Natural Phenomena'' <u>2</u>:106-125 (2007) [http://dx.doi.org/10.1051/mmnp:2008021 CrossRef]
-* <span class="pmbm">Kazmierczak B</span>, <span class="nopmbm">Volpert V</span>. '''Calcium waves in systems with immobile buffers as a limit of waves for systems with nonzero diffusion''', ''Nonlinearity'' <u>21</u>:71-98 (2007) [http://dx.doi.org/10.1088/0951-7715/21/1/004 CrossRef]
-* <span class="pmbm">Błoński S</span>, <span class="pmbm">Kowalewski TA</span>. '''PIV analysis of turbulent flow in a micro-channel''', ''J&nbsp;Theor&nbsp;Appl&nbsp;Mech'' <u>45</u>:489-503 (2007) [{{SERVER}}/publications/Blonski-2007-JTheorApplMech.pdf PDF]
-===2006===
-* <span class="pmbm">Lipniacki T</span>, <span class="nopmbm">Paszek P</span>, <span class="nopmbm">Brasier AR</span>, <span class="nopmbm">Luxon B</span>, <span class="nopmbm">Kimmel M</span>. '''Stochastic regulation in early immune response''', ''Biophys&nbsp;J'' <u>90</u>:725-742 (2006) [http://www.ncbi.nlm.nih.gov/pubmed/16284261 PubMed] [http://dx.doi.org/10.1529/biophysj.104.056754 CrossRef] | [{{SERVER}}/publications/Lipniacki-2006-BiophysJ.pdf PDF]  [{{SERVER}}/publications/supplementary/Lipniacki-2006-BiophysJ-SourceCode.zip Code]
-* <span class="pmbm">Lipniacki T</span>, <span class="nopmbm">Paszek P</span>, <span class="nopmbm">Marciniak-Czochra A</span>, <span>Brasier AR</span>, <span class="nopmbm">Kimmel M</span>. '''Transcriptional stochasticity in gene expression''', ''J&nbsp;Theor Biol'' <u>238</u>:348-367 (2006) [http://www.ncbi.nlm.nih.gov/pubmed/16039671 PubMed] [http://dx.doi.org/10.1016/j.jtbi.2005.05.032 CrossRef]
-* <span class="pmbm">Lipniacki T</span>. '''Dynamics of superfluid <sup>4</sup>He: Two-scale approach''', ''Eur&nbsp;J Mech B-Fluid'' <u>25</u>(4):435-458 (2006) [http://dx.doi.org/10.1016/j.euromechflu.2006.04.004 CrossRef]
-* <span class="nopmbm">Kocarev L</span>, <span class="pmbm">Szczepanski J</span>, <span class="nopmbm">Amigo JM</span>, <span class="nopmbm">Tomovski I</span>. '''Discrete Chaos-I: Theory''', ''IEEE&nbsp;T Circuits&nbsp;Sys'' <u>53</u>:1300-1309 (2006) [http://dx.doi.org/10.1109/TCSI.2006.874181 CrossRef]
-* <span class="nopmbm">Amigo JM</span>, <span class="nopmbm">Kocarev L</span>, <span class="pmbm">Szczepanski J</span>. '''Order patterns and chaos''', ''Phys Lett&nbsp;A'' <u>355</u>:27-31 (2006) [http://dx.doi.org/10.1016/j.physleta.2006.01.093 CrossRef] |
-* <span class="pmbm">Korczyk P</span>, <span class="nopmbm">Malinowski SP</span>, <span class="pmbm">Kowalewski TA</span>. '''Mixing of cloud and clear air in centimeter scales observed in laboratory by means of Particle Image Velocimetry''', ''Atmospheric Res'' <u>82</u>:173-182 (2006) [http://dx.doi.org/10.1016/j.atmosres.2005.09.009 CrossRef]
-* <span class="nopmbm">Sielamowicz I</span>, <span class="pmbm">Błoński S</span>, <span class="pmbm">Kowalewski TA</span> '''Digital Particle Image Velocimetry (DPIV) technique in measurements of granular material flows, Part 2 of 3 - converging hoppers''', ''Chem Eng Sci'' <u>61</u>(16):5307-5317(2006) [http://dx.doi.org/10.1016/j.ces.2006.03.002 CrossRef]
-===2005===
-* <span class="nopmbm">Paszek P</span>, <span class="pmbm">Lipniacki T</span>, <span class="nopmbm">Brasier AR</span>, <span class="nopmbm">Tian B</span>, <span class="nopmbm">Nowak DE</span>, <span class="nopmbm">Kimmel M</span>. '''Stochastic effects of multiple regulators on expression profiles in eukaryotes''', ''J&nbsp;Theor Biol'' <u>233</u>:423-433 (2005) [http://www.ncbi.nlm.nih.gov/pubmed/15652150 PubMed] [http://dx.doi.org/10.1016/j.jtbi.2004.10.023 CrossRef]
-* <span class="nopmbm">Chaturvedi R</span>, <span class="nopmbm">Huang C</span>, <span class="nopmbm">Schneider T</span>, <span class="nopmbm">Izaguirre J</span>, <span class="nopmbm">Glimm T</span>, <span class="nopmbm">Hentschel G</span>, <span class="nopmbm">Glazier J</span>, <span class="pmbm">Kazmierczak B</span>, <span class="nopmbm">Newman S</span>, <span class="nopmbm">Alber M</span>. '''On multiscale approaches to three-dimensional modeling of morphogenesis''', ''J&nbsp;R&nbsp;Soc Interface'' <u>2</u>:237-253 (2005) [http://www.ncbi.nlm.nih.gov/pubmed/16849182 PubMed] [http://dx.doi.org/10.1098/rsif.2005.0033 CrossRef] | [{{SERVER}}/publications/Chaturvedi-2005-JRSocInterface.pdf PDF]
-* <span class="nopmbm">Alber M</span>, <span class="nopmbm">Hentschel HGE</span>, <span class="pmbm">Kazmierczak B</span>, <span class="nopmbm">Newman S</span>. '''Existence of solutions to a new model of biological pattern formation''', ''J&nbsp;Math Anal Appl'' <u>308</u>:175-194 (2005) [http://dx.doi.org/10.1016/j.jmaa.2004.11.026 CrossRef]
-* <span class="nopmbm">Alber M</span>, <span class="nopmbm">Glimm T</span>, <span class="nopmbm">Hentschel HGE</span>, <span class="pmbm">Kazmierczak B</span>, <span class="nopmbm">Newman S</span>. '''Stability of ''n''-dimensional patterns in a generalized Turing system: implications for a biological patterns formation''', ''Nonlinearity'' <u>18</u>:125 (2005) [http://dx.doi.org/10.1088/0951-7715/18/1/007 CrossRef]
-* <span class="nopmbm">Belk M</span>, <span class="pmbm">Kazmierczak B</span>, <span class="nopmbm">Volpert V</span>. '''Existence of reaction-diffusion-convection waves in unbounded strips''', ''Int&nbsp;J Math Math Sci'' <u>2005</u>(2):169-193 (2005) [http://dx.doi.org/10.1155/IJMMS.2005.169 CrossRef]
-* <span class="pmbm">Kazmierczak B</span>. Fale biegnące w ośrodkach z dyfuzją, ''Pismo PTM - Matematyka Stosowana. Matematyka dla Społeczeństwa 6'', <u>47</u>:29-47 (2005)
-* <span class="pmbm">Szczepanski J</span>, <span class="nopmbm">Amigo JM</span>, <span class="nopmbm">Michalek T</span>, <span class="nopmbm">Kocarev L</span>. '''Cryptographically Secure Substitutions Based on the Approximation of Mixing Maps''', ''IEEE&nbsp;T Circuits Sys'' <u>52</u>:443-453 (2005) [http://dx.doi.org/10.1109/TCSI.2004.841602 CrossRef]
-* <span class="nopmbm">Amigó JM</span>, <span class="pmbm">Szczepanski J</span>, <span class="nopmbm">Kocarev L</span>. '''A Chaos-based approach to the design of cryptographically secure substitutions''', ''Phys Lett&nbsp;A'' <u>343</u>:55-60 (2005) [http://dx.doi.org/10.1016/j.physleta.2005.05.057 CrossRef]
-* <span class="pmbm">Peradzyński Z</span>, <span class="pmbm">Kazmierczak B</span>. '''On mechanochemical calcium waves''', ''Arch&nbsp;Appl Mech'' <u>74</u>:827-833 (2005) [http://dx.doi.org/10.1007/s00419-005-0392-7 CrossRef]
-* <span class="nopmbm">Barral S</span>, <span class="nopmbm">Makowski K</span>, <span class="pmbm">Peradzyński Z</span>, <span class="nopmbm">Dudek M</span>. '''Transit time instability in Hall Thruster''', ''Phys Plasmas'' <u>12</u>, 073504 (2005) [http://dx.doi.org/10.1063/1.1947796 CrossRef]
-* <span class="pmbm">Kowalewski TA</span>, <span class="pmbm">Blonski S</span>, <span class="nopmbm">Barral S</span>. '''Experiments and modelling of electrospinning process''', ''B&nbsp;Pol Acad Sci-Tech'' <u>53</u>:385-394 (2005) [{{SERVER}}/publications/Kowalewski-2005-BPolAcadSciTech.pdf PDF]
-* <span class="nopmbm">Sielamowicz I</span>, <span class="pmbm">Błoński S</span>, <span class="pmbm">Kowalewski TA</span>. '''Optical technique DPIV in measurements of granular material flows, Part 1 of 3 - plane hoppers''', ''Chem Eng Sci'' <u>60</u>(2):589-598 (2005) [http://dx.doi.org/10.1016/j.ces.2004.07.135 CrossRef]
-* <span class="nopmbm">Michalek T</span>, <span class="pmbm">Kowalewski TA</span>, <span class="nopmbm">Saler B</span>. '''Natural convection for anomalous density variation of water - numerical benchmark''', ''Prog&nbsp;In Comput Fluid Dyn'' <u>5</u>:158-170 (2005) [http://dx.doi.org/10.1504/PCFD.2005.006751 CrossRef]
-===2004===
-* <span class="pmbm">Kaźmierczak B</span>, <span class="nopmbm">Piechór K</span>. '''Some heteroclinic solutions of a model of skin pattern formation''', ''Math&nbsp;Meth Appl Sci'' <u>27</u>:1317-1345 (2004) [http://dx.doi.org/10.1002/mma.511 CrossRef]
-* <span class="pmbm">Szczepański J</span>, <span class="nopmbm">Amigó JM</span>, <span class="nopmbm">Wajnryb E</span>, <span class="nopmbm">Sanchez-Vives MV</span>. '''Characterizing spike trains with Lempel–Ziv complexity''', ''Neurocomputing'' <u>58-60</u>:79-84 (2004) [http://dx.doi.org/10.1016/j.neucom.2004.01.026 CrossRef]
-* <span class="nopmbm">Kocarev L</span>, <span class="pmbm">Szczepanski J</span>. '''Finite-Space Lyapunov exponents and pseudochaos''', ''Phys&nbsp;Rev&nbsp;Lett'' <u>93</u> (2004) [http://www.ncbi.nlm.nih.gov/pubmed/15601163 PubMed] [http://link.aps.org/doi/10.1103/PhysRevLett.93.234101 CrossRef]
-* <span class="pmbm">Szczepanski J</span>, <span class="nopmbm">Wajnryb E</span>, <span class="nopmbm">Amigó JM</span>, <span class="nopmbm">Sanchez-Vives MV</span>, <span class="nopmbm">Slater M</span>. '''Biometric random number generators''', ''Comput Secur'' <u>23</u>:77-84 (2004) [http://dx.doi.org/10.1016/S0167-4048(04)00064-1 CrossRef]
-* <span class="nopmbm">Amigó JM</span>, <span class="pmbm">Szczepański J</span>, <span class="nopmbm">Wajnryb E</span>, <span class="nopmbm">Sanchez-Vives MV</span>. '''Estimating the entropy rate of spike trains via Lempel-Ziv complexity''', ''Neural Comput'' <u>16</u>:717-736 (2004) [http://www.ncbi.nlm.nih.gov/pubmed/15025827 PubMed] [http://dx.doi.org/10.1162/089976604322860677 CrossRef]
-* <span class="pmbm">Lipniacki T</span>, <span class="nopmbm">Paszek P</span>, <span class="nopmbm">Brasier AR</span>, <span class="nopmbm">Luxon B</span>, <span class="nopmbm">Kimmel M</span>. '''Mathematical model of NF-κB regulatory module''', ''J Theor Biol'' <u>228</u>:195-215 (2004) [http://www.ncbi.nlm.nih.gov/pubmed/15094015 PubMed] [http://dx.doi.org/10.1016/j.jtbi.2004.01.001 CrossRef]
-* <span class="nopmbm">Kucaba-Pietal A</span>, <span class="nopmbm">Walenta Z</span>, <span class="pmbm">Peradzynski Z</span>. '''Size and wall effects in flows in nanochannels''', ''Turbulence'' <u>10</u>:77-81 (2004)
-* <span class="pmbm">Kazmierczak B</span>, <span class="nopmbm">Vakulenko S</span>, <span class="nopmbm">Genieys S</span>. '''Pattern formation capacity of spatially extended systems''', ''Phys&nbsp;Rev&nbsp;E'' <u>69</u>, 016215 (2004) [http://www.ncbi.nlm.nih.gov/pubmed/14995701 PubMed] [http://dx.doi.org/10.1103/PhysRevE.69.016215 CrossRef]
-* <span class="pmbm">Kowalewski TA</span>. '''Experimental Methods for Quantitative Analysis of Thermally Driven Flows in Phase Change with Convection''', eds. T. Kowalewski, D. Gobin, ''CISM Course Lecture Notes'' <u>449</u>:167-215 (2004)
-* <span class="pmbm">Kowalewski TA</span>. '''Fluids in Motion''', ''Academia'' 32-34 (2004)
-* <span class="pmbm">Kowalewski TA</span>, <span class="nopmbm">Pakleza J</span>, <span class="nopmbm">Trzcinski R</span>, <span class="nopmbm">Zachara A</span>. '''Experimental analysis of vapour bubble growth on heated surface''', ''Archives of Theromdynamics'' <u>25</u>:1-12 (2004)
-* <span class="nopmbm">Sielamowicz I</span>, <span class="pmbm">Kowalewski TA</span>, <span class="pmbm">Błoński S</span>. '''Central and Eccentric Granular Material Flows in Bins/Hoppers Registered by Optical Technique DPIV''', ''Acta Agrophysica'' <u>4</u>(2):519-531 (2004)
-===2003===
-* <span class="pmbm">Kazmierczak B</span>, <span class="pmbm">Piechór K</span>. '''Some heteroclinic solutions of a model of skin pattern formation''', ''Math&nbsp;Meth Appl Sci'' <u>27</u>:1317-1345 (2004) [http://dx.doi.org/10.1002/mma.511 CrossRef]
-* <span class="pmbm">Kazmierczak B</span>, <span class="nopmbm">Volpert V</span>. '''Existence of heteroclinic orbits for systems satysfying monotonicity conditions''', ''Nonlinear Anal-Theor'' <u>55</u>:467-491 (2003) [http://dx.doi.org/10.1016/S0362-546X(03)00247-5 CrossRef]
-* <span class="nopmbm">Amigó JM</span>, <span class="pmbm">Szczepański J</span>. '''Approximations of dynamical systems and their applications to cryptography''', ''Int&nbsp;J Bifurcat Chaos'' <u>13</u>:1937-1948 (2003) [http://dx.doi.org/10.1142/S0218127403007771 CrossRef]
-* <span class="pmbm">Szczepanski J</span>, <span class="nopmbm">Amigo JM</span>, <span class="nopmbm">Wajnryb E</span>, <span class="nopmbm">Sanchez-Vives MV</span>. '''Application of Lempel–Ziv complexity to the analysis of neural discharges''', ''Network: Comput Neural Syst'' <u>14</u>:335-350 (2003) [http://www.ncbi.nlm.nih.gov/pubmed/12790188 PubMed] [http://dx.doi.org/10.1088/0954-898X_14_2_309 CrossRef]
-* <span class="nopmbm">Amigó JM</span>, <span class="pmbm">Szczepański J</span>, <span class="nopmbm">Wajnryb E</span>, <span class="nopmbm">Sanchez-Vives MV</span>. '''On the number of states of the neuronal sources''', ''BioSystems'' <u>68</u>:57-66 (2003) [http://www.ncbi.nlm.nih.gov/pubmed/12543522 PubMed] [http://dx.doi.org/10.1016/S0303-2647(02)00156-9 CrossRef]
-* <span class="pmbm">Szczepanski J</span>, <span class="nopmbm">Michalek T</span>. '''Random fields approach to the study of DNA chains''', ''J&nbsp;Biol Phys''<u> 29</u>:39-54 (2003) [http://dx.doi.org/10.1023/A:1022508206826 CrossRef]
-* <span class="pmbm">Lipniacki T</span>. '''Shape-preserving solutions for quantum vortex motion under localized induction approximation''', ''Phys Fluids'' <u>15</u>:1381-1395 (2003) [http://dx.doi.org/10.1063/1.1566756 CrossRef]
-* <span class="nopmbm">Michalek T</span>, <span class="pmbm">Kowalewski TA</span>. '''Simualtion of the water freezing process - numerical benchmarks''', ''TASK Quarterly'' <u>7</u>:389-408 (2003)
-* <span class="pmbm">Kowalewski TA</span>, <span class="nopmbm">Mosyak A</span>, <span class="nopmbm">Hetsroni G</span>. '''Tracking of coherent thermal structures on a heated wall. Part 2: DNS Simulation''', ''Exp in Fluids'' <u>34</u>:390-396 (2003) [http://dx.doi.org/10.1007/s00348-002-0574-9 CrossRef]
-* <span class="pmbm">Peradzynski Z</span>, <span class="nopmbm">da Silva ML</span>, <span class="nopmbm">Lago V</span>, <span class="nopmbm">Bedjamin E</span>, <span class="nopmbm">Lebehot A</span>, <span class="nopmbm">Mazouffre S</span>, <span class="nopmbm">Dudeck M</span>, <span class="nopmbm">Szymanski Z</span>, <span class="nopmbm">Chikaou A</span>, <span class="nopmbm">Boubert M</span>. '''Modeling of radiative plasma sorrounding a space probe entering Mars atmosphere''', ''High Temp Mat Pr-Isr'' <u>7</u>:115-125 (2003)
-===2002===
-* <span class="pmbm">Kazmierczak B</span>, <span class="pmbm">Lipniacki T</span>. '''Homoclinic solutions in mechanical systems with small dissipation. Application to DNA dynamics''',  ''J&nbsp;Math&nbsp;Biol'' <u>44</u>:309-329 (2002) [http://www.ncbi.nlm.nih.gov/pubmed/11984642 PubMed] [http://dx.doi.org/10.1007/s002850100131 CrossRef]
-* <span class="pmbm">Lipniacki T</span>. '''Quasi-static solution for quantum vortex motion under the localized induction approximation''', ''J&nbsp;Fluid&nbsp;Mech'' <u>477</u>:321-337 (2002) [http://dx.doi.org/10.1017/S0022112002003282 CrossRef]
-* <span class="nopmbm">Kucaba-Pietal A</span>, <span class="nopmbm">Walenta Z</span>, <span class="pmbm">Peradzynski Z</span>. '''What are the limits of applicability of the theory of micropolar fluids for description of real fluid flows through narrow channels''', ''Proc&nbsp;Appl Math Mech'' <u>1</u>:308-309 (2002) [http://dx.doi.org/10.1002/1617-7061(200203)1:1%3c308::AID-PAMM308%3e3.0.CO;2-B CrossRef]
-* <span class="nopmbm">Gorska A</span>, <span class="nopmbm">Gorski K</span>, <span class="nopmbm">Kotulski Z</span>, <span class="nopmbm">Paszkiewicz A</span>, <span class="pmbm">Szczepanski J</span>. '''New experimental results in differential-linear cryptanalysis of reduced variants of DES''', ''Int&nbsp;Ser&nbsp;Eng'' <u>664</u>:335-348 (2002)
-* <span class="pmbm">Kazmierczak B</span>. '''Existence of heteroclinic orbits for systems satisfying monotonicity conditions''', ''Lecture Notes in Nonlinear Analysis'', <u>3</u>:93-107 (2002)
-* <span class="pmbm">Kazmierczak B</span>, <span class="nopmbm">Piechor K</span>. '''Parametric dependence of phase boundary solution to model kinetic equations on parameters''', ''ZAMP'' <u>53</u>:539-568 (2002) [http://dx.doi.org/10.1007/s00033-002-8168-1 CrossRef]
-* <span class="pmbm">Kazmierczak B</span>, <span class="nopmbm">Piechor K</span>. '''Phase boundary solutions to model kinetic equations via the conley index theory, Part II''', ''Math Comput Model'' <u>36</u>:1393-1408 (2002) [http://dx.doi.org/10.1016/S0895-7177(02)00296-0 CrossRef]
-* <span class="pmbm">Kazmierczak B</span>, <span class="nopmbm">Massot M</span>, <span class="nopmbm">Volpert V</span>, <span class="pmbm">Peradzynski Z</span>. '''Solvability conditions for elliptic problems with non-Fredholm operators''', ''Applicationes Mathematicae'' <u>29</u>:219-238 (2002)
-* <span class="pmbm">Kurzyna J</span>, <span class="nopmbm">Gascon N</span>, <span class="nopmbm">Bonhomme G</span>, <span class="nopmbm">Dudeck M</span>, <span class="nopmbm">Makowski K</span>, <span class="pmbm">Peradzynski Z</span>, <span class="nopmbm">Lago V</span>, <span class="nopmbm">Lebehot A</span>. '''Oscillations of discharge current in stationary plasma thruster''', ''High Temp Mat Pr-Isr'' <u>6</u>:181-190 (2002)
-* <span class="nopmbm">Pakleza J</span>, <span class="nopmbm">Duluc MC</span>, <span class="pmbm">Kowalewski TA</span>. '''Experimental investigation of vapour bubble growth''', ''Heat Transfer'' <u>3</u>:479-485 (2002)
-* <span class="nopmbm">Stasiek J</span>, <span class="pmbm">Kowalewski TA</span>. '''Thermochromic liquid crystals applied for heat transfer research''', ''Opto-electron Rev'' <u>10</u>:1-10 (2002) [http://dx.doi.org/10.1117/12.472179 CrossRef]
-* <span class="nopmbm">Monti P</span>, <span class="nopmbm">Fernando HJ</span>, <span class="nopmbm">Princevac M</span>, <span class="pmbm">Kowalewski TA</span>, <span class="nopmbm">Chan WC</span>, <span class="nopmbm">Padyjak ER</span>. '''Observations of flow and turbulence in the nocturnal boundary layer over a slope''', ''J&nbsp;Atmospheric Sci'' <u>59</u>:2513-2534 (2002) <span style="display:none">[http://dx.doi.org/10.1175/1520-0469(2002)059<2513:OOFATI>2.0.CO;2 CrossRef] |</span>
-* <span class="pmbm">Kowalewski TA</span>, <span class="nopmbm">Cybulski A</span>, <span class="nopmbm">Michalek T</span>. '''Experimental benchmark for casting problems''', ''Heat Transfer'' <u>4</u>:813-819 (2002)
-* <span class="pmbm">Kowalewski TA</span>. '''Particle Image Velocimetry and Thermometry in two phase problems, in Visualization and Imaging in Transport Phenomena''', ''Annals of New York Academy of Sciences'' <u>972</u>:213-222, edts. S Siedeman & A Landesberg, NY (2002)
-===2001===
-* <span class="pmbm">Szczepański J</span>. '''A new result on the Nirenberg problem for expanding maps''', ''Nonlinear Anal'' <u>43</u>:91-99 (2001) [http://dx.doi.org/10.1016/S0362-546X(99)00180-7 CrossRef]
-* <span class="pmbm">Szczepanski J</span>, <span class="nopmbm">Kotulski Z</span>. '''Pseudorandom Number Generators Based on Chaotic Dynamical Systems''', ''Open Syst Inf Dyn'' <u>8</u>:137-146 (2001) [http://dx.doi.org/10.1023/A:1011950531970 CrossRef]
-* <span class="pmbm">Lipniacki T</span>. '''Evolution of line-length density and anisotropy of quantum tangle in <sup>4</sup>He''', ''Phys&nbsp;Rev&nbsp;B'' <u>64</u>:214516-1-9 (2001) [http://dx.doi.org/10.1103/PhysRevB.64.214516 CrossRef]
-* <span class="pmbm">Lipniacki T</span>. '''Thermodynamics of local DNA openings''', ''Phys&nbsp;Rev&nbsp;E'' <u>64</u>: 051919-1-5 (2001) [http://www.ncbi.nlm.nih.gov/pubmed/11735980 PubMed] [http://dx.doi.org/10.1103/PhysRevE.64.051919 CrossRef]
-* <span class="pmbm">Lipniacki T</span>. '''On quantum turbulence in superfluid Helium''', ''Arch&nbsp;Mech'' <u>53</u>:23-43 (2001)
-* <span class="pmbm">Lipniacki T</span>. '''Torsional travelling waves in DNA''', ''J&nbsp;Nonlinear Math Phys'' <u>8</u>:188-194 (2001) [http://dx.doi.org/10.2991/jnmp.2001.8.s.33 CrossRef] | [{{SERVER}}/publications/Lipniacki-2001-JNonlinearMathPhys.pdf PDF-ms]
-* <span class="pmbm">Lipniacki T</span>. '''Statics of rigid units chain''', ''Int&nbsp;J Bifurcat Chaos'' <u>11</u>:845-854 (2001) [http://dx.doi.org/10.1142/S0218127401002377 CrossRef]
-===2000 and older===
-* <span class="pmbm">Lipniacki T</span>. '''Evolution of quantum vortices following reconnection''', ''Eur&nbsp;J&nbsp;Mech&nbsp;B-Fluids'', <u>19</u>:361-378 (2000) [http://dx.doi.org/10.1016/S0997-7546(00)00123-0 CrossRef]
-* <span class="pmbm">Lipniacki T</span>. '''Chemically driven traveling waves in DNA''', ''Phys&nbsp;Rev&nbsp;E'' <u>60</u>:7253-7561 (1999) [http://dx.doi.org/10.1103/PhysRevE.60.7253 CrossRef]
-* <span class="nopmbm">Kotulski Z</span>, <span class="pmbm">Szczepański J</span>. '''Application of discrete chaotic dynamical systems in cryptography-DCC method''', ''Int&nbsp;J&nbsp;Bifurcat&nbsp;Chaos'' <u>9</u>:1121-1135 (1999)
-* <span class="pmbm">Lipniacki T</span>. '''Dynamics of quantum vortices in superfluid He''', ''Arch&nbsp;Mech'' <u>50</u>:439-454 (1998)
-* <span class="pmbm">Lipniacki T</span>. '''Non-linear mechanical model of DNA dynamics''', ''Nuovo Cimento D'' <u>20</u>:831-843 (1998) [http://dx.doi.org/10.1007/BF03185484 CrossRef]
-* <span class="pmbm">Lipniacki T</span>. '''Can the system of discrete vortices imitate boundary layer,''' ''Arch&nbsp;Mech'' <u>49</u>:103-109 (1998)
-* <span class="pmbm">Szczepański J</span>, <span class="nopmbm">Kotulski Z</span>. '''On two motions of a particle driven by equivalent ergodic and chaotic reflection laws''', ''Arch&nbsp;Mech'' <u>50</u>:865-875 (1998)
-* <span class="pmbm">Lipniacki T</span>. '''Dynamics of superfluid Helium - Limits of the Vinen model''', ''Arch&nbsp;Mech'' <u>49</u>:615-633 (1997)
-* <span class="nopmbm">Kotulski Z</span>, <span class="pmbm">Szczepański J</span>. '''Discrete chaotic cryptography''', ''Ann Phys'' <u>6</u>:381-394 (1997) [http://dx.doi.org/10.1002/andp.19975090504 CrossRef]
-* <span class="pmbm">Szczepański J</span>, <span class="nopmbm">Wajnryb E</span>. '''Do Ergodic or Chaotic Properties of the Reflection Law Imply Ergodicity or Chaotic Behavior of a Particle’s Motion?''' ''Chaos&nbsp;Soliton&nbsp;Fract'' <u>5</u>:77-89 (1995) [http://dx.doi.org/10.1016/0960-0779(95)91375-8 CrossRef]
-* <span class="pmbm">Szczepański J</span>. '''On a problem of Nirenberg concerning expanding maps in Hilbert space''', ''Proc AMS'' <u>116</u>:1041-1044 (1992) [https://dx.doi.org/10.2307/2159486 CrossRef]
-* <span class="pmbm">Szczepański J</span>, <span class="nopmbm">E. Wajnryb</span>. '''Long time behavior of the one-particle distribution function for the Knudsen gas for the convex domain''', ''Phys&nbsp;Rev&nbsp;A'' <u>44</u>:3615-3621 (1991) [http://dx.doi.org/10.1103/PhysRevA.44.3615 CrossRef]
-* <span class="pmbm">Szczepański J</span>. '''On the basis of the statistical mechanics. The Liouville equation for systems with an infinite countable number of degrees of freedom''', ''Physica&nbsp;A'' <u>157</u>:955-982 (1989) [http://dx.doi.org/10.1016/0378-4371(89)90075-7 CrossRef]
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