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Laboratory of Modeling in Biology and Medicine

biophysics  |  systems biology  |  bioengineering


    

Head:
Prof. Tomasz Lipniacki — institutional www
e-mail: tlipnia@ippt.pan.pl or tomek@rice.edu
tel.: +48 22 8261281 ext. 409
room: 325



Recent publications of our Lab:

  • Czerkies M, Korwek Z, Prus W, Kochańczyk M, Jaruszewicz-Błońska J, Tudelska K, Błoński S, Kimmel M, Brasier AR, Lipniacki T. Cell fate in antiviral response arises in the crosstalk of IRF, NF-κB and JAK/STAT pathways, Nature Communications 9:493 (2018) PubMed CrossRef | PDF SuppInfo-PDF SuppData SuppMovies SuppCode
  • Jetka T, Nienałtowski K, Filippi S, Stumpf MPH, Komorowski M. An information-theoretic framework for deciphering pleiotropic and noisy biochemical signaling, Nature Communications 9:4591 (2018) PubMed CrossRef
  • Kochańczyk M, Hlavacek WS, Lipniacki T. Spatkin: a simulator for rule-based modeling of biomolecular site dynamics on surfaces, Bioinformatics (2017) 33(22):3667–3669 PubMed CrossRef Www
  • Pierini F, Lanzi M, Nakielski P, Pawłowska S, Urbanek O, Zembrzycki K, Kowalewski TA. Single-material organic solar cells based on electrospun fullerene-grafted polythiophene nanofibers, Macromolecules 50(13):4972–81 (2017) CrossRef
  • Adimy M, Chekroun A, Kaźmierczak B. Traveling waves in a coupled reaction–diffusion and difference model of hematopoiesis, Journal of Differential Equations 262(7):4085–4128 (2017) CrossRef
  • Kazmierczak B, Tsai J-C, Bialecki S. The propagation phenomenon of solutions of a parabolic problem on the sphere, Math Model Meth Appl Sci 28(10):2001–2067 (2018) CrossRef


      More publications...


To learn more on our research, you may read our perspective on regulatory pathway modeling (a book chapter in Polish).